RNA–Protein interactions for RNA: ENST00000489858.1

RAB3GAP1-205, Transcript of RAB3 GTPase activating protein catalytic subunit 1, humanhuman

TSL 2

Gene RAB3GAP1, Length 557 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3GAP1-205ENST00000489858 CERS2Q96G23 380 aa9.79□□□□□ -0.84
RAB3GAP1-205ENST00000489858 OXNAD1Q96HP4 312 aaPredicted RBP9.79□□□□□ -0.84
RAB3GAP1-205ENST00000489858 VAT1Q99536 393 aa9.79□□□□□ -0.84
RAB3GAP1-205ENST00000489858 ACBD6Q9BR61 282 aa9.79□□□□□ -0.84
RAB3GAP1-205ENST00000489858 TRIM56Q9BRZ2 755 aaKnown RBP9.79□□□□□ -0.84
RAB3GAP1-205ENST00000489858 CEP41Q9BYV8 373 aa9.79□□□□□ -0.84
RAB3GAP1-205ENST00000489858 WWP1Q9H0M0 922 aa9.79□□□□□ -0.84
RAB3GAP1-205ENST00000489858 LRRC40Q9H9A6 602 aa9.79□□□□□ -0.84
RAB3GAP1-205ENST00000489858 MIOSQ9NXC5 875 aa9.79□□□□□ -0.84
RAB3GAP1-205ENST00000489858 KCNK4Q9NYG8 393 aa9.79□□□□□ -0.84
RAB3GAP1-205ENST00000489858 SIRPGQ9P1W8 387 aa9.79□□□□□ -0.84
RAB3GAP1-205ENST00000489858 KANSL3Q9P2N6 904 aa9.79□□□□□ -0.84
RAB3GAP1-205ENST00000489858 CACNG4Q9UBN1 327 aa9.79□□□□□ -0.84
RAB3GAP1-205ENST00000489858 LNPEPQ9UIQ6 1025 aa9.79□□□□□ -0.84
RAB3GAP1-205ENST00000489858 HAO1Q9UJM8 370 aa9.79□□□□□ -0.84
RAB3GAP1-205ENST00000489858 DNMT3LQ9UJW3 386 aa9.79□□□□□ -0.84
RAB3GAP1-205ENST00000489858 RPL26L1Q9UNX3 145 aaKnown RBP9.79□□□□□ -0.84
RAB3GAP1-205ENST00000489858 TIMM13Q9Y5L4 95 aaPredicted RBP9.79□□□□□ -0.84
RAB3GAP1-205ENST00000489858 NR2E3Q9Y5X4 410 aa9.79□□□□□ -0.84
RAB3GAP1-205ENST00000489858 TDRD15B5MCY1 1934 aaKnown RBP9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 ZNF638Q14966 1978 aaKnown RBP9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 CCDC195A0A1B0GUA6 201 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 FAM72CH0Y354 149 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 TRAFD1O14545 582 aaPredicted RBP9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 SEPT4O43236 478 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 PGK1P00558 417 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 CCND1P24385 295 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 CD52P31358 61 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 GP5P40197 560 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 THPOP40225 353 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 NPY2RP49146 381 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 SERPINB8P50452 374 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 CACNA2D1P54289 1103 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 ZNF33AQ06730 810 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 BST1Q10588 318 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 CRHR2Q13324 411 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 TUSC3Q13454 348 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 KRT72Q14CN4 511 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 TEX44Q53QW1 395 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 GRTP1Q5TC63 336 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 FAM72AQ5TYM5 149 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 FAM72DQ6L9T8 149 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 CDHR3Q6ZTQ4 885 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 BHLHA9Q7RTU4 235 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 MTDHQ86UE4 582 aaKnown RBP9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 FAM72BQ86X60 149 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 CEP57Q86XR8 500 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 CCDC116Q8IYX3 515 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 SMC1BQ8NDV3 1235 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 DQX1Q8TE96 717 aaKnown RBP9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 RNF34Q969K3 372 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 ZNF669Q96BR6 464 aaPredicted RBP9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 PPP1R2P1Q96PQ5 205 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 CPNE1Q99829 537 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 RTP3Q9BQQ7 232 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 SIKE1Q9BRV8 207 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 TACO1Q9BSH4 297 aaKnown RBP9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 COLEC11Q9BWP8 271 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 SLC13A1Q9BZW2 595 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 TKTL2Q9H0I9 626 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 WDCPQ9H6R7 721 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 CASS4Q9NQ75 786 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 BFARQ9NZS9 450 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 ZFATQ9P243 1243 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 HEY2Q9UBP5 337 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 PADI3Q9ULW8 664 aa9.78□□□□□ -0.84
RAB3GAP1-205ENST00000489858 CASP8AP2Q9UKL3 1982 aa9.77□□□□□ -0.84
RAB3GAP1-205ENST00000489858 NLRC5Q86WI3 1866 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 MYO16Q9Y6X6 1858 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 HMX2A2RU54 273 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 M0QZQ0 153 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 KCNK1O00180 336 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 FCHO1O14526 889 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 TPP1O14773 563 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 FGF10O15520 208 aaPredicted RBP9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 DLDP09622 509 aaKnown RBP9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 SRGAP2BP0DMP2 458 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 MYL2P10916 166 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 NFKB1P19838 968 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 TYMPP19971 482 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 IBSPP21815 317 aaPredicted RBP9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 IGFBP6P24592 240 aaPredicted RBP9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 PTPN4P29074 926 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 RABGGTBP53611 331 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 CSE1LP55060 971 aaKnown RBP9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 CRADDP78560 199 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 PDE1BQ01064 536 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 OCRLQ01968 901 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 STX3Q13277 289 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 INSCQ1MX18 579 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 BRMS1LQ5PSV4 323 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 WLSQ5T9L3 541 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 PM20D1Q6GTS8 502 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 OVOS1Q6IE37 1185 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 FAM171BQ6P995 826 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 DCLRE1AQ6PJP8 1040 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 C4orf50Q6ZRC1 276 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 LONP2Q86WA8 852 aa9.77□□□□□ -0.85
RAB3GAP1-205ENST00000489858 NPWQ8N729 165 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms