RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 MAMLD1Q13495 774 aa10.04□□□□□ -0.8
NOD1-208ENST00000489614 EFTUD2Q15029 972 aaKnown RBP eCLIP10.04□□□□□ -0.87e-6■■■■■ 30.5
NOD1-208ENST00000489614 TRIP10Q15642 601 aa10.04□□□□□ -0.8
NOD1-208ENST00000489614 CYP2A13Q16696 494 aa10.04□□□□□ -0.8
NOD1-208ENST00000489614 PTPN20Q4JDL3 420 aa10.04□□□□□ -0.8
NOD1-208ENST00000489614 TNFAIP8L3Q5GJ75 292 aa10.04□□□□□ -0.8
NOD1-208ENST00000489614 EGFLAMQ63HQ2 1017 aa10.04□□□□□ -0.8
NOD1-208ENST00000489614 KAZNQ674X7 775 aa10.04□□□□□ -0.8
NOD1-208ENST00000489614 AADACL2Q6P093 401 aa10.04□□□□□ -0.8
NOD1-208ENST00000489614 RNF19BQ6ZMZ0 732 aa10.04□□□□□ -0.8
NOD1-208ENST00000489614 HACE1Q8IYU2 909 aa10.04□□□□□ -0.8
NOD1-208ENST00000489614 PDZD8Q8NEN9 1154 aa10.04□□□□□ -0.8
NOD1-208ENST00000489614 SHKBP1Q8TBC3 707 aa10.04□□□□□ -0.8
NOD1-208ENST00000489614 SLC35F5Q8WV83 523 aa10.04□□□□□ -0.8
NOD1-208ENST00000489614 KHSRPQ92945 711 aaKnown RBP eCLIP10.04□□□□□ -0.8
NOD1-208ENST00000489614 TMIGD2Q96BF3 282 aa10.04□□□□□ -0.8
NOD1-208ENST00000489614 CNBD2Q96M20 576 aa10.04□□□□□ -0.8
NOD1-208ENST00000489614 PANX3Q96QZ0 392 aa10.04□□□□□ -0.8
NOD1-208ENST00000489614 C11orf84Q9BUA3 381 aaPredicted RBP10.04□□□□□ -0.8
NOD1-208ENST00000489614 RBM38Q9H0Z9 239 aaKnown RBP10.04□□□□□ -0.8
NOD1-208ENST00000489614 DPEP3Q9H4B8 488 aa10.04□□□□□ -0.8
NOD1-208ENST00000489614 GID8Q9NWU2 228 aa10.04□□□□□ -0.8
NOD1-208ENST00000489614 HELZP42694 1942 aaKnown RBP10.04□□□□□ -0.8
NOD1-208ENST00000489614 TLR3O15455 904 aaKnown RBP10.03□□□□□ -0.8
NOD1-208ENST00000489614 THAP12O43422 761 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 KRT19P08727 400 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 CDH2P19022 906 aaPredicted RBP10.03□□□□□ -0.8
NOD1-208ENST00000489614 IL4RP24394 825 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 SPIDRQ14159 915 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 STILQ15468 1287 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 FAM171BQ6P995 826 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 POTEHQ6S545 545 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 CROCCP2Q86T23 111 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 TTC7BQ86TV6 843 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 TMEM86AQ8N2M4 240 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 HPS1Q92902 700 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 OSBPL6Q9BZF3 934 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 NXF1Q9UBU9 619 aaKnown RBP10.03□□□□□ -0.8
NOD1-208ENST00000489614 HCRTO43612 131 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 CIB2O75838 187 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 ZWINTO95229 277 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 CD58P19256 250 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 ITGB8P26012 769 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 MRPL58Q14197 206 aaKnown RBP10.03□□□□□ -0.8
NOD1-208ENST00000489614 ANKRD20A4Q4UJ75 823 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 C6orf163Q5TEZ5 329 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 USP43Q70EL4 1123 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 ARCQ7LC44 396 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 XYLT1Q86Y38 959 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 RFWD2Q8NHY2 731 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 GABPB2Q8TAK5 448 aaPredicted RBP10.03□□□□□ -0.8
NOD1-208ENST00000489614 SUN5Q8TC36 379 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 CPA5Q8WXQ8 436 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 ZNF689Q96CS4 500 aaPredicted RBP10.03□□□□□ -0.8
NOD1-208ENST00000489614 SUSD3Q96L08 255 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 APOL6Q9BWW8 343 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 NT5C1AQ9BXI3 368 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 KLHL25Q9H0H3 589 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 CDC42EP4Q9H3Q1 356 aaKnown RBP10.03□□□□□ -0.8
NOD1-208ENST00000489614 ALG13Q9NP73 1137 aaKnown RBP10.03□□□□□ -0.8
NOD1-208ENST00000489614 GRHL1Q9NZI5 618 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 TMEM191CA6NGB0 347 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 CAPN8A6NHC0 703 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 MED7O43513 233 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 BUD23O43709 281 aaKnown RBP10.03□□□□□ -0.8
NOD1-208ENST00000489614 RRM1P23921 792 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 LMO2P25791 158 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 SCNN1AP37088 669 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 ARL1P40616 181 aaPredicted RBP10.03□□□□□ -0.8
NOD1-208ENST00000489614 LBX1P52954 281 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 NFX1Q12986 1120 aaKnown RBP10.03□□□□□ -0.8
NOD1-208ENST00000489614 PDAP1Q13442 181 aaKnown RBP10.03□□□□□ -0.8
NOD1-208ENST00000489614 KRT81Q14533 505 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 TLR1Q15399 786 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 ADRM1Q16186 407 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 PHKG1Q16816 387 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 SLC45A4Q5BKX6 768 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 SPDYCQ5MJ68 293 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 PPP1R26Q5T8A7 1209 aaPredicted RBP10.03□□□□□ -0.8
NOD1-208ENST00000489614 MFSD5Q6N075 450 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 SLC38A6Q8IZM9 456 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 SLC26A7Q8TE54 656 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 GDPD5Q8WTR4 605 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 RNF38Q9H0F5 515 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 C11orf49Q9H6J7 331 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 MAN1C1Q9NR34 630 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 CACNG4Q9UBN1 327 aa10.03□□□□□ -0.8
NOD1-208ENST00000489614 A0A1B0GTW7 788 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 J3QRK9 145 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 XPO1O14980 1071 aaKnown RBP10.02□□□□□ -0.81
NOD1-208ENST00000489614 TBC1D4O60343 1298 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 ERBB2P04626 1255 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 RBP3P10745 1247 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 SERPINB6P35237 376 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 KDSRQ06136 332 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 TIGD5Q53EQ6 642 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 OTOAQ7RTW8 1153 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 AMIGO2Q86SJ2 522 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 DCLK2Q8N568 766 aa10.02□□□□□ -0.81
NOD1-208ENST00000489614 FNIP1Q8TF40 1166 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms