RNA–Protein interactions for RNA: ENST00000489567.5

SSR1-210, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 3 BASIC

Gene SSR1, Length 1,893 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-210ENST00000489567 TRMT11Q7Z4G4 463 aaKnown RBP8.06□□□□□ -1.12
SSR1-210ENST00000489567 SETD3Q86TU7 594 aaPredicted RBP8.06□□□□□ -1.12
SSR1-210ENST00000489567 CCDC117Q8IWD4 279 aaPredicted RBP8.06□□□□□ -1.12
SSR1-210ENST00000489567 ZNF557Q8N988 423 aaPredicted RBP8.06□□□□□ -1.12
SSR1-210ENST00000489567 ZBTB44Q8NCP5 570 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 TSTD1Q8NFU3 115 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 UCMAQ8WVF2 138 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 HSPH1Q92598 858 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 ATOH1Q92858 354 aaPredicted RBP8.06□□□□□ -1.12
SSR1-210ENST00000489567 DESI2Q9BSY9 194 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 LACRTQ9GZZ8 138 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 MUC3BQ9H195 1237 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 GOLPH3Q9H4A6 298 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 NOL6Q9H6R4 1146 aaKnown RBP8.06□□□□□ -1.12
SSR1-210ENST00000489567 PRDM16Q9HAZ2 1276 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 TMEM248Q9NWD8 314 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 ERVW-1Q9UQF0 538 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 HYOU1Q9Y4L1 999 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 DUSP10Q9Y6W6 482 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 DOCK4Q8N1I0 1966 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 TCRBV21S2A2A0A5A6 115 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 TTC34A8MYJ7 566 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 APBB3O95704 486 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 MT-CO1P00395 513 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 ATP5BP06576 529 aaKnown RBP8.06□□□□□ -1.12
SSR1-210ENST00000489567 RHOCP08134 193 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 C7P10643 843 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 VAV1P15498 845 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 GOT1P17174 413 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 GABRG2P18507 467 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 HOXA6P31267 233 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 ACVRL1P37023 503 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 DGKEP52429 567 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 ECT2LQ008S8 904 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 SLC12A1Q13621 1099 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 TCEAL1Q15170 157 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 SPA17Q15506 151 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 FNDC3BQ53EP0 1204 aaKnown RBP8.06□□□□□ -1.12
SSR1-210ENST00000489567 PPP6R3Q5H9R7 873 aaPredicted RBP8.06□□□□□ -1.12
SSR1-210ENST00000489567 SERPINA13PQ6UXR4 307 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 RASSF3Q86WH2 238 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 CAMKK1Q8N5S9 505 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 RTL3Q8N8U3 475 aaKnown RBP8.06□□□□□ -1.12
SSR1-210ENST00000489567 NETO2Q8NC67 525 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 HMGB4Q8WW32 186 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 EPAS1Q99814 870 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 TPSD1Q9BZJ3 242 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 MKRN2Q9H000 416 aaKnown RBP8.06□□□□□ -1.12
SSR1-210ENST00000489567 CD93Q9NPY3 652 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.06□□□□□ -1.127e-7■□□□□ 11
SSR1-210ENST00000489567 KLHL11Q9NVR0 708 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 ZSCAN32Q9NX65 697 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 CWC15Q9P013 229 aaKnown RBP8.06□□□□□ -1.12
SSR1-210ENST00000489567 VPS51Q9UID3 782 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 VPS28Q9UK41 221 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 PLA2G4CQ9UP65 541 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 MFHAS1Q9Y4C4 1052 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 ACTL7AQ9Y615 435 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 MUC6Q6W4X9 2439 aa8.06□□□□□ -1.12
SSR1-210ENST00000489567 ILVBLA1L0T0 632 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 K7ERQ8 282 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 HRO43593 1189 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 LILRB5O75023 590 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 ZMPSTE24O75844 475 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 MOCS3O95396 460 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 EPHX1P07099 455 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 CD48P09326 243 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 NDUFV2P19404 249 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 IL4RP24394 825 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 GJC1P36383 396 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 SSR1P43307 286 aaKnown RBP8.05□□□□□ -1.12
SSR1-210ENST00000489567 COPAP53621 1224 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 TPI1P60174 286 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 GNA12Q03113 381 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 MMRN1Q13201 1228 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 DPYSL2Q16555 572 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 BOLA3Q53S33 107 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 C6orf118Q5T5N4 469 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 SDE2Q6IQ49 451 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 LINGO4Q6UY18 593 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 RFX8Q6ZV50 586 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 POLNQ7Z5Q5 900 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 WDR5BQ86VZ2 330 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 LONP2Q86WA8 852 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 PSTKQ8IV42 348 aaKnown RBP8.05□□□□□ -1.12
SSR1-210ENST00000489567 TP53INP2Q8IXH6 220 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 RHOT2Q8IXI1 618 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 NPWQ8N729 165 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 FRMD1Q8N878 549 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 MRGPRX1Q96LB2 322 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 SPON2Q9BUD6 331 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 KLC2Q9H0B6 622 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 PCDH18Q9HCL0 1135 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 TRIM10Q9UDY6 481 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 EBF1Q9UH73 591 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 INVSQ9Y283 1065 aa8.05□□□□□ -1.12
SSR1-210ENST00000489567 WASH4PA8MWX3 477 aa8.04□□□□□ -1.12
SSR1-210ENST00000489567 EEF2KO00418 725 aaKnown RBP8.04□□□□□ -1.12
SSR1-210ENST00000489567 DCLK1O15075 740 aa8.04□□□□□ -1.12
SSR1-210ENST00000489567 NPC1O15118 1278 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms