RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 BBS7Q8IWZ6 715 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 ZNF567Q8N184 647 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 MREGQ8N565 214 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 TDRD5Q8NAT2 981 aaKnown RBP10.25□□□□□ -0.77
USP11-211ENST00000489111 CPT1BQ92523 772 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 PRCCQ92733 491 aaPredicted RBP10.25□□□□□ -0.77
USP11-211ENST00000489111 USP13Q92995 863 aaPredicted RBP10.25□□□□□ -0.77
USP11-211ENST00000489111 EXOC4Q96A65 974 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 TMA16Q96EY4 203 aaKnown RBP10.25□□□□□ -0.77
USP11-211ENST00000489111 RUFY1Q96T51 708 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 APOL5Q9BWW9 433 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 MUC3BQ9H195 1237 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 MAGEH1Q9H213 219 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 GBA3Q9H227 469 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 ADAM7Q9H2U9 754 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 NOL6Q9H6R4 1146 aaKnown RBP10.25□□□□□ -0.77
USP11-211ENST00000489111 KIF9Q9HAQ2 790 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 HAUS2Q9NVX0 235 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 ZNF212Q9UDV6 495 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 RSPH14Q9UHP6 348 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 CCL26Q9Y258 94 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 ATP8A1Q9Y2Q0 1164 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 FARP1Q9Y4F1 1045 aaPredicted RBP10.25□□□□□ -0.77
USP11-211ENST00000489111 TTLL3Q9Y4R7 772 aa10.25□□□□□ -0.77
USP11-211ENST00000489111 ILVBLA1L0T0 632 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 GOLGA6CA6NDK9 693 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 GOLGA6BA6NDN3 693 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 F5H423 210 aaPredicted RBP10.24□□□□□ -0.77
USP11-211ENST00000489111 H0Y626 953 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 GOLGA8MH3BSY2 632 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 ATP8B1O43520 1251 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 MAFKO60675 156 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 PPFIA2O75334 1257 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 PAPLNO95428 1278 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 JCHAINP01591 159 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 GOLGA6DP0CG33 693 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 CCNB1P14635 433 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 HOXB8P17481 243 aaPredicted RBP10.24□□□□□ -0.77
USP11-211ENST00000489111 PSMB4P28070 264 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 SGSHP51688 502 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 PMS2P54278 862 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 SARNPP82979 210 aaKnown RBP10.24□□□□□ -0.77
USP11-211ENST00000489111 ZXDBP98169 803 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 ZBTB17Q13105 803 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 SERINC3Q13530 473 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 SEMA5AQ13591 1074 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 KCNC3Q14003 757 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 PRPSAP1Q14558 356 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 KCNJ11Q14654 390 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 HIF1AQ16665 826 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 PARP6Q2NL67 630 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 MPPE1Q53F39 396 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 CFAP58Q5T655 872 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 ANKRD22Q5VYY1 191 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 IL31Q6EBC2 164 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 ANKRD54Q6NXT1 300 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 ZNF783Q6ZMS7 281 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 GET4Q7L5D6 327 aaPredicted RBP10.24□□□□□ -0.77
USP11-211ENST00000489111 PID1Q7Z2X4 250 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 MTERF4Q7Z6M4 381 aaKnown RBP10.24□□□□□ -0.77
USP11-211ENST00000489111 GPR149Q86SP6 731 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 MFN1Q8IWA4 741 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 FAM217AQ8IXS0 508 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 PDIK1LQ8N165 341 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 CPXM2Q8N436 756 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 CARNMT1Q8N4J0 409 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 NAT8LQ8N9F0 302 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 ITFG1Q8TB96 612 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 ZSCAN18Q8TBC5 510 aaPredicted RBP10.24□□□□□ -0.77
USP11-211ENST00000489111 USP33Q8TEY7 942 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 DDI1Q8WTU0 396 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 UBLCP1Q8WVY7 318 aaPredicted RBP10.24□□□□□ -0.77
USP11-211ENST00000489111 BHMTQ93088 406 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 PABPC5Q96DU9 382 aaKnown RBP10.24□□□□□ -0.77
USP11-211ENST00000489111 AGAP3Q96P47 875 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 PPP1R2P1Q96PQ5 205 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 SPON2Q9BUD6 331 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 FUT8Q9BYC5 575 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 FRMD8Q9BZ67 464 aaPredicted RBP10.24□□□□□ -0.77
USP11-211ENST00000489111 VIPAS39Q9H9C1 493 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 ETNK1Q9HBU6 452 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 DNAJC17Q9NVM6 304 aaKnown RBP10.24□□□□□ -0.77
USP11-211ENST00000489111 GOLGA6AQ9NYA3 693 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 TBC1D14Q9P2M4 693 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 HPCAL4Q9UM19 191 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 CHD9Q3L8U1 2897 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 CEP290O15078 2479 aa10.24□□□□□ -0.77
USP11-211ENST00000489111 TMEM265A0A087WTH1 108 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 A0A1W2PPC1 479 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 SLC9A3R1O14745 358 aaPredicted RBP10.23□□□□□ -0.77
USP11-211ENST00000489111 TP73O15350 636 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 LINC01565O15544 149 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 PRAMEF11O60813 436 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 TMEM63AO94886 807 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 LUC7L3O95232 432 aaKnown RBP10.23□□□□□ -0.77
USP11-211ENST00000489111 METTL18O95568 372 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 GLP2RO95838 553 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 NFKB1P19838 968 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 TPSB2P20231 275 aa10.23□□□□□ -0.77
USP11-211ENST00000489111 MAGEA6P43360 314 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms