RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 RNASEH1O60930 286 aaKnown RBP25.67■■□□□ 1.7
HMGN1-217ENST00000489072 KCNK5O95279 499 aa25.67■■□□□ 1.7
HMGN1-217ENST00000489072 SEMA4FO95754 770 aa25.67■■□□□ 1.7
HMGN1-217ENST00000489072 CALB1P05937 261 aa25.67■■□□□ 1.7
HMGN1-217ENST00000489072 RHOCP08134 193 aa25.67■■□□□ 1.7
HMGN1-217ENST00000489072 SDC4P31431 198 aa25.67■■□□□ 1.7
HMGN1-217ENST00000489072 RFC1P35251 1148 aaPredicted RBP25.67■■□□□ 1.7
HMGN1-217ENST00000489072 PTPN9P43378 593 aa25.67■■□□□ 1.7
HMGN1-217ENST00000489072 VASPP50552 380 aaPredicted RBP25.67■■□□□ 1.7
HMGN1-217ENST00000489072 ACBD5Q5T8D3 534 aaPredicted RBP25.67■■□□□ 1.7
HMGN1-217ENST00000489072 TFAP2DQ7Z6R9 452 aa25.67■■□□□ 1.7
HMGN1-217ENST00000489072 PPP1R9BQ96SB3 815 aa25.67■■□□□ 1.7
HMGN1-217ENST00000489072 PSMB7Q99436 277 aa25.67■■□□□ 1.7
HMGN1-217ENST00000489072 MIR1-1HGQ9H1L0 117 aa25.67■■□□□ 1.7
HMGN1-217ENST00000489072 FBXL12Q9NXK8 326 aa25.67■■□□□ 1.7
HMGN1-217ENST00000489072 ZNF212Q9UDV6 495 aa25.67■■□□□ 1.7
HMGN1-217ENST00000489072 EIF2B4Q9UI10 523 aaKnown RBP25.67■■□□□ 1.7
HMGN1-217ENST00000489072 SCML1Q9UN30 329 aa25.67■■□□□ 1.7
HMGN1-217ENST00000489072 SLCO1B1Q9Y6L6 691 aa25.67■■□□□ 1.7
HMGN1-217ENST00000489072 TPRP12270 2363 aaKnown RBP25.67■■□□□ 1.7
HMGN1-217ENST00000489072 PCNX2A6NKB5 2137 aa25.66■■□□□ 1.7
HMGN1-217ENST00000489072 TCRBV5S1A1TA0A578 114 aa25.66■■□□□ 1.7
HMGN1-217ENST00000489072 SRGAP2O75044 1071 aa25.66■■□□□ 1.7
HMGN1-217ENST00000489072 ADRB1P08588 477 aa25.66■■□□□ 1.7
HMGN1-217ENST00000489072 KRT3P12035 628 aa25.66■■□□□ 1.7
HMGN1-217ENST00000489072 GNSP15586 552 aa25.66■■□□□ 1.7
HMGN1-217ENST00000489072 NNMTP40261 264 aa25.66■■□□□ 1.7
HMGN1-217ENST00000489072 FILIP1LQ4L180 1135 aa25.66■■□□□ 1.7
HMGN1-217ENST00000489072 USP30Q70CQ3 517 aa25.66■■□□□ 1.7
HMGN1-217ENST00000489072 C3orf20Q8ND61 904 aa25.66■■□□□ 1.7
HMGN1-217ENST00000489072 C1orf216Q8TAB5 229 aa25.66■■□□□ 1.7
HMGN1-217ENST00000489072 CENPIQ92674 756 aaPredicted RBP25.66■■□□□ 1.7
HMGN1-217ENST00000489072 MUC3BQ9H195 1237 aa25.66■■□□□ 1.7
HMGN1-217ENST00000489072 SGK2Q9HBY8 427 aa25.66■■□□□ 1.7
HMGN1-217ENST00000489072 SLC25A13Q9UJS0 675 aa25.66■■□□□ 1.7
HMGN1-217ENST00000489072 MYO6Q9UM54 1294 aa25.66■■□□□ 1.7
HMGN1-217ENST00000489072 A0A1B0GTW7 788 aa25.65■■□□□ 1.7
HMGN1-217ENST00000489072 A0A1W2PP55 124 aa25.65■■□□□ 1.7
HMGN1-217ENST00000489072 LRRC53A6NM62 1247 aa25.65■■□□□ 1.7
HMGN1-217ENST00000489072 ATP9BO43861 1147 aa25.65■■□□□ 1.7
HMGN1-217ENST00000489072 SNAP91O60641 907 aa25.65■■□□□ 1.7
HMGN1-217ENST00000489072 SLC8A1P32418 973 aa25.65■■□□□ 1.7
HMGN1-217ENST00000489072 PSMD8P48556 350 aa25.65■■□□□ 1.7
HMGN1-217ENST00000489072 C1QBPQ07021 282 aaKnown RBP25.65■■□□□ 1.7
HMGN1-217ENST00000489072 WDR59Q6PJI9 974 aa25.65■■□□□ 1.7
HMGN1-217ENST00000489072 STRADAQ7RTN6 431 aa25.65■■□□□ 1.7
HMGN1-217ENST00000489072 SETD3Q86TU7 594 aaPredicted RBP25.65■■□□□ 1.7
HMGN1-217ENST00000489072 GANCQ8TET4 914 aa25.65■■□□□ 1.7
HMGN1-217ENST00000489072 SELENOOQ9BVL4 669 aa25.65■■□□□ 1.7
HMGN1-217ENST00000489072 CBX8Q9HC52 389 aa25.65■■□□□ 1.7
HMGN1-217ENST00000489072 NCKAP1Q9Y2A7 1128 aa25.65■■□□□ 1.7
HMGN1-217ENST00000489072 ZBTB32Q9Y2Y4 487 aaPredicted RBP25.65■■□□□ 1.7
HMGN1-217ENST00000489072 CHD8Q9HCK8 2581 aa25.64■■□□□ 1.7
HMGN1-217ENST00000489072 A0A0D9SEW6 157 aa25.64■■□□□ 1.7
HMGN1-217ENST00000489072 A0A1W2PQC6 194 aa25.64■■□□□ 1.7
HMGN1-217ENST00000489072 GIPC1O14908 333 aa25.64■■□□□ 1.7
HMGN1-217ENST00000489072 CCDC172P0C7W6 258 aa25.64■■□□□ 1.7
HMGN1-217ENST00000489072 ADRA1BP35368 520 aa25.64■■□□□ 1.7
HMGN1-217ENST00000489072 ATXN3P54252 364 aaPredicted RBP25.64■■□□□ 1.7
HMGN1-217ENST00000489072 HDAC4P56524 1084 aa25.64■■□□□ 1.7
HMGN1-217ENST00000489072 ELAVL3Q14576 367 aaKnown RBP25.64■■□□□ 1.7
HMGN1-217ENST00000489072 DLG2Q15700 870 aa25.64■■□□□ 1.7
HMGN1-217ENST00000489072 N4BP2L1Q5TBK1 243 aaPredicted RBP25.64■■□□□ 1.7
HMGN1-217ENST00000489072 E4F1Q66K89 784 aaPredicted RBP25.64■■□□□ 1.7
HMGN1-217ENST00000489072 PSAPL1Q6NUJ1 521 aa25.64■■□□□ 1.7
HMGN1-217ENST00000489072 SH2D3CQ8N5H7 860 aa25.64■■□□□ 1.7
HMGN1-217ENST00000489072 MINDY1Q8N5J2 469 aa25.64■■□□□ 1.7
HMGN1-217ENST00000489072 AADATQ8N5Z0 425 aa25.64■■□□□ 1.7
HMGN1-217ENST00000489072 FAM172AQ8WUF8 416 aa25.64■■□□□ 1.7
HMGN1-217ENST00000489072 SNX19Q92543 992 aa25.64■■□□□ 1.7
HMGN1-217ENST00000489072 BIRC7Q96CA5 298 aa25.64■■□□□ 1.7
HMGN1-217ENST00000489072 MAGEB5Q9BZ81 275 aa25.64■■□□□ 1.7
HMGN1-217ENST00000489072 NEUROG2Q9H2A3 272 aa25.64■■□□□ 1.7
HMGN1-217ENST00000489072 TAS2R14Q9NYV8 317 aa25.64■■□□□ 1.7
HMGN1-217ENST00000489072 VPS51Q9UID3 782 aa25.64■■□□□ 1.7
HMGN1-217ENST00000489072 CHD5Q8TDI0 1954 aa25.64■■□□□ 1.69
HMGN1-217ENST00000489072 SIGLEC16A6NMB1 481 aa25.63■■□□□ 1.69
HMGN1-217ENST00000489072 MT-CO1P00395 513 aa25.63■■□□□ 1.69
HMGN1-217ENST00000489072 SYPP08247 313 aa25.63■■□□□ 1.69
HMGN1-217ENST00000489072 GPD1P21695 349 aa25.63■■□□□ 1.69
HMGN1-217ENST00000489072 NOVA1P51513 510 aaKnown RBP25.63■■□□□ 1.69
HMGN1-217ENST00000489072 GRIK2Q13002 908 aa25.63■■□□□ 1.69
HMGN1-217ENST00000489072 ACCSLQ4AC99 568 aa25.63■■□□□ 1.69
HMGN1-217ENST00000489072 MANEALQ5VSG8 457 aa25.63■■□□□ 1.69
HMGN1-217ENST00000489072 ACAD10Q6JQN1 1059 aa25.63■■□□□ 1.69
HMGN1-217ENST00000489072 LUZP1Q86V48 1076 aa25.63■■□□□ 1.69
HMGN1-217ENST00000489072 CCDC185Q8N715 623 aa25.63■■□□□ 1.69
HMGN1-217ENST00000489072 ZYG11BQ9C0D3 744 aa25.63■■□□□ 1.69
HMGN1-217ENST00000489072 TTYH3Q9C0H2 523 aa25.63■■□□□ 1.69
HMGN1-217ENST00000489072 ADAMTS1Q9UHI8 967 aa25.63■■□□□ 1.69
HMGN1-217ENST00000489072 HS3ST2Q9Y278 367 aa25.63■■□□□ 1.69
HMGN1-217ENST00000489072 ACACBO00763 2458 aa25.62■■□□□ 1.69
HMGN1-217ENST00000489072 PLXNA2O75051 1894 aa25.62■■□□□ 1.69
HMGN1-217ENST00000489072 BCAT2O15382 392 aaPredicted RBP25.62■■□□□ 1.69
HMGN1-217ENST00000489072 RNASEH2AO75792 299 aaKnown RBP25.62■■□□□ 1.69
HMGN1-217ENST00000489072 FSBPO95073 299 aa25.62■■□□□ 1.69
HMGN1-217ENST00000489072 IL1BP01584 269 aa25.62■■□□□ 1.69
HMGN1-217ENST00000489072 SRCP12931 536 aa25.62■■□□□ 1.69
HMGN1-217ENST00000489072 OR1E1P30953 314 aa25.62■■□□□ 1.69
HMGN1-217ENST00000489072 METAP1P53582 386 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms