RNA–Protein interactions for RNA: ENST00000488489.5

NECAB3-213, Transcript of N-terminal EF-hand calcium binding protein 3, humanhuman

TSL 2

Gene NECAB3, Length 2,142 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAB3-213ENST00000488489 TRIM56Q9BRZ2 755 aaKnown RBP20.69■□□□□ 0.9
NECAB3-213ENST00000488489 EIF2B3Q9NR50 452 aaKnown RBP20.69■□□□□ 0.9
NECAB3-213ENST00000488489 PIH1D1Q9NWS0 290 aaKnown RBP20.69■□□□□ 0.9
NECAB3-213ENST00000488489 ZNF212Q9UDV6 495 aa20.69■□□□□ 0.9
NECAB3-213ENST00000488489 TGM5O43548 720 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 CREB1P16220 341 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 PAPOLAP51003 745 aaKnown RBP20.68■□□□□ 0.9
NECAB3-213ENST00000488489 KPNA1P52294 538 aaPredicted RBP20.68■□□□□ 0.9
NECAB3-213ENST00000488489 CDK16Q00536 496 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 NUGGCQ68CJ6 796 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 KLHDC10Q6PID8 442 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 CIR1Q86X95 450 aaPredicted RBP20.68■□□□□ 0.9
NECAB3-213ENST00000488489 GPR65Q8IYL9 337 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 CENPTQ96BT3 561 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 MRRFQ96E11 262 aaKnown RBP20.68■□□□□ 0.9
NECAB3-213ENST00000488489 SEC16BQ96JE7 1060 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 NACA2Q9H009 215 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 TMEM248Q9NWD8 314 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 MYO7AQ13402 2215 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 TCRBV9S1A1TA0A576 114 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 DRGXA6NNA5 263 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 ZNF189O75820 626 aaPredicted RBP20.68■□□□□ 0.9
NECAB3-213ENST00000488489 PHBP35232 272 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 COG7P83436 770 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 SPARCL1Q14515 664 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 VEPH1Q14D04 833 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 UMODL1-AS1Q8N2C9 162 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 USP33Q8TEY7 942 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 ARHGEF2Q92974 986 aaKnown RBP20.68■□□□□ 0.9
NECAB3-213ENST00000488489 PSMG2Q969U7 264 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 XPO6Q96QU8 1125 aaKnown RBP20.68■□□□□ 0.9
NECAB3-213ENST00000488489 VAT1Q99536 393 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 ACSS3Q9H6R3 686 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 XAB2Q9HCS7 855 aaKnown RBP20.68■□□□□ 0.9
NECAB3-213ENST00000488489 GKN1Q9NS71 199 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 TRHDEQ9UKU6 1024 aa20.68■□□□□ 0.9
NECAB3-213ENST00000488489 CCNB1P14635 433 aa20.67■□□□□ 0.9
NECAB3-213ENST00000488489 TSHRP16473 764 aa20.67■□□□□ 0.9
NECAB3-213ENST00000488489 NFKB1P19838 968 aa20.67■□□□□ 0.9
NECAB3-213ENST00000488489 MMP13P45452 471 aa20.67■□□□□ 0.9
NECAB3-213ENST00000488489 MNAT1P51948 309 aa20.67■□□□□ 0.9
NECAB3-213ENST00000488489 CACNA2D3Q8IZS8 1091 aa20.67■□□□□ 0.9
NECAB3-213ENST00000488489 MDM1Q8TC05 714 aa20.67■□□□□ 0.9
NECAB3-213ENST00000488489 MAML1Q92585 1016 aa20.67■□□□□ 0.9
NECAB3-213ENST00000488489 RPRD1AQ96P16 312 aaPredicted RBP20.67■□□□□ 0.9
NECAB3-213ENST00000488489 RAD9AQ99638 391 aa20.67■□□□□ 0.9
NECAB3-213ENST00000488489 STMN4Q9H169 189 aaPredicted RBP20.67■□□□□ 0.9
NECAB3-213ENST00000488489 GBA3Q9H227 469 aa20.67■□□□□ 0.9
NECAB3-213ENST00000488489 YY1AP1Q9H869 796 aa20.67■□□□□ 0.9
NECAB3-213ENST00000488489 ZNF334Q9HCZ1 680 aaPredicted RBP20.67■□□□□ 0.9
NECAB3-213ENST00000488489 ZC3H7BQ9UGR2 993 aaKnown RBP20.67■□□□□ 0.9
NECAB3-213ENST00000488489 CXCL14O95715 111 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 OAS1P00973 400 aaKnown RBP20.66■□□□□ 0.9
NECAB3-213ENST00000488489 KLKB1P03952 638 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 SLC6A4P31645 630 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 EPHB3P54753 998 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 FAM133BQ5BKY9 247 aaKnown RBP20.66■□□□□ 0.9
NECAB3-213ENST00000488489 LRRC8BQ6P9F7 803 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 PSRC1Q6PGN9 363 aaPredicted RBP20.66■□□□□ 0.9
NECAB3-213ENST00000488489 CHSY1Q86X52 802 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 TDRPQ86YL5 185 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 SP7Q8TDD2 431 aaPredicted RBP20.66■□□□□ 0.9
NECAB3-213ENST00000488489 CFAP36Q96G28 342 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 MLPHQ9BV36 600 aaPredicted RBP20.66■□□□□ 0.9
NECAB3-213ENST00000488489 ALG13Q9NP73 1137 aaKnown RBP20.66■□□□□ 0.9
NECAB3-213ENST00000488489 ARHGAP42A6NI28 874 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 MATN3O15232 486 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 CSPG5O95196 566 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 C1QAP02745 245 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 TACR2P21452 398 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 ERVFC1P60507 584 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 CRADDP78560 199 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 KCTD11Q693B1 232 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 RFWD3Q6PCD5 774 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 OTOP3Q7RTS5 596 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 TMC7Q7Z402 723 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 WBP2Q969T9 261 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 LRRC39Q96DD0 335 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 EBNA1BP2Q99848 306 aaKnown RBP20.66■□□□□ 0.9
NECAB3-213ENST00000488489 SLC4A7Q9Y6M7 1214 aa20.66■□□□□ 0.9
NECAB3-213ENST00000488489 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP20.65■□□□□ 0.9
NECAB3-213ENST00000488489 USP12O75317 370 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 MLNP12872 115 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 ATP2A2P16615 1042 aaKnown RBP20.65■□□□□ 0.9
NECAB3-213ENST00000488489 DRD4P21917 467 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 GEMIN4P57678 1058 aaKnown RBP20.65■□□□□ 0.9
NECAB3-213ENST00000488489 SARNPP82979 210 aaKnown RBP20.65■□□□□ 0.9
NECAB3-213ENST00000488489 TMED2Q15363 201 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 GKAP1Q5VSY0 366 aaPredicted RBP20.65■□□□□ 0.9
NECAB3-213ENST00000488489 LILRA6Q6PI73 481 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 PRPF39Q86UA1 669 aaKnown RBP20.65■□□□□ 0.9
NECAB3-213ENST00000488489 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.65■□□□□ 0.9
NECAB3-213ENST00000488489 HERVK_113Q902F9 699 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 HMCESQ96FZ2 354 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 IL12RB2Q99665 862 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 IL21Q9HBE4 155 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 STK39Q9UEW8 545 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 IPO11Q9UI26 975 aaKnown RBP20.65■□□□□ 0.9
NECAB3-213ENST00000488489 MAD1L1Q9Y6D9 718 aa20.65■□□□□ 0.9
NECAB3-213ENST00000488489 TLL1O43897 1013 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms