RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 DDX6P26196 483 aaKnown RBP eCLIP6.23□□□□□ -1.41
CDHR3-213ENST00000488386 YWHAQP27348 245 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 PSMC2P35998 433 aaKnown RBP6.23□□□□□ -1.41
CDHR3-213ENST00000488386 GRIA2P42262 883 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 CXCL12P48061 93 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 CCR3P51677 355 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 STX17P56962 302 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 CHRNEQ04844 493 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 ZNF268Q14587 947 aaPredicted RBP6.23□□□□□ -1.41
CDHR3-213ENST00000488386 MAPRE1Q15691 268 aaKnown RBP6.23□□□□□ -1.41
CDHR3-213ENST00000488386 CCDC6Q16204 474 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 SGSM1Q2NKQ1 1148 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 ZNF658Q5TYW1 1059 aaPredicted RBP6.23□□□□□ -1.41
CDHR3-213ENST00000488386 TCERG1LQ5VWI1 586 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 KLHL10Q6JEL2 608 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 CLEC20AQ6ZU45 233 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 RALGPS2Q86X27 583 aaPredicted RBP6.23□□□□□ -1.41
CDHR3-213ENST00000488386 NUP93Q8N1F7 819 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 NAT16Q8N8M0 369 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 ZBTB44Q8NCP5 570 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 ATRIPQ8WXE1 791 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 NDRG1Q92597 394 aaKnown RBP6.23□□□□□ -1.41
CDHR3-213ENST00000488386 SMARCE1Q969G3 411 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 TTLL2Q9BWV7 592 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 KIF9Q9HAQ2 790 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 NMUR1Q9HB89 426 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 OSER1Q9NX31 292 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 ZSCAN32Q9NX65 697 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 CFAP97Q9P2B7 532 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 NCDNQ9UBB6 729 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 TNFRSF10DQ9UBN6 386 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 MAN1B1Q9UKM7 699 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 FBXO4Q9UKT5 387 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 ARHGAP26Q9UNA1 814 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 SMG5Q9UPR3 1016 aaKnown RBP6.23□□□□□ -1.41
CDHR3-213ENST00000488386 INVSQ9Y283 1065 aa6.23□□□□□ -1.41
CDHR3-213ENST00000488386 ZFHX2Q9C0A1 2572 aaPredicted RBP6.23□□□□□ -1.41
CDHR3-213ENST00000488386 A0A1W2PQU0 124 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 FAM221BA6H8Z2 402 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 HHLA1C9JL84 531 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 TULP2O00295 520 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 CETN3O15182 167 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 CYP17A1P05093 508 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 THBDP07204 575 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 EPB41P11171 864 aaKnown RBP6.22□□□□□ -1.41
CDHR3-213ENST00000488386 ENDOUP21128 410 aaKnown RBP6.22□□□□□ -1.41
CDHR3-213ENST00000488386 OPRD1P41143 372 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 MAGEA9P43362 315 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 NOP2P46087 812 aaKnown RBP6.22□□□□□ -1.41
CDHR3-213ENST00000488386 MXI1P50539 228 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 AP3M2P53677 418 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 NUCB2P80303 420 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 KDSRQ06136 332 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 LRRC32Q14392 662 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 PDGFRLQ15198 375 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 NFIL3Q16649 462 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 PRSS53Q2L4Q9 553 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 ZNF528Q3MIS6 628 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 TMEM196Q5HYL7 178 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 DGKKQ5KSL6 1271 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 EMC10Q5UCC4 262 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 MBLAC2Q68D91 279 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 KRT39Q6A163 491 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 ZC3H14Q6PJT7 736 aaKnown RBP6.22□□□□□ -1.41
CDHR3-213ENST00000488386 INTS8Q75QN2 995 aaKnown RBP6.22□□□□□ -1.41
CDHR3-213ENST00000488386 SPATC1Q76KD6 591 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 TTC30AQ86WT1 665 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 BBS7Q8IWZ6 715 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 LILRA2Q8N149 483 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 SPEM1Q8N4L4 309 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 CPA6Q8N4T0 437 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 CCDC33Q8N5R6 958 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 RPLP0P6Q8NHW5 317 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 NELL1Q92832 810 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 KAT5Q92993 513 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 CD101Q93033 1021 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 RMDN1Q96DB5 314 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 CYFIP2Q96F07 1278 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 SMARCD1Q96GM5 515 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 TNIP3Q96KP6 325 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 SLITRK1Q96PX8 696 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 P2RY13Q9BPV8 354 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 SMOC1Q9H4F8 434 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 TMEM8AQ9HCN3 771 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 PARD6AQ9NPB6 346 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 DMAP1Q9NPF5 467 aaPredicted RBP6.22□□□□□ -1.41
CDHR3-213ENST00000488386 IMPACTQ9P2X3 320 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 ATP8B3O60423 1300 aa6.22□□□□□ -1.41
CDHR3-213ENST00000488386 FAM170AA1A519 330 aa6.21□□□□□ -1.42
CDHR3-213ENST00000488386 TRDMT1O14717 391 aaKnown RBP6.21□□□□□ -1.42
CDHR3-213ENST00000488386 IKBKBO14920 756 aa6.21□□□□□ -1.42
CDHR3-213ENST00000488386 DCLK1O15075 740 aa6.21□□□□□ -1.42
CDHR3-213ENST00000488386 MAPK13O15264 365 aa6.21□□□□□ -1.42
CDHR3-213ENST00000488386 PDPK1O15530 556 aa6.21□□□□□ -1.42
CDHR3-213ENST00000488386 OLFM2O95897 454 aa6.21□□□□□ -1.42
CDHR3-213ENST00000488386 HMBSP08397 361 aa6.21□□□□□ -1.42
CDHR3-213ENST00000488386 FAM163BP0C2L3 166 aa6.21□□□□□ -1.42
CDHR3-213ENST00000488386 MSL3P1P0C860 447 aa6.21□□□□□ -1.42
CDHR3-213ENST00000488386 FAM200BP0CF97 657 aa6.21□□□□□ -1.42
CDHR3-213ENST00000488386 P4HA1P13674 534 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms