RNA–Protein interactions for RNA: ENST00000487899.1

RAB11FIP3-210, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 3

Gene RAB11FIP3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-210ENST00000487899 HLA-BQ31612 363 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 SLC25A52Q3SY17 297 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 ALFQ53S48 1182 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 KCNT1Q5JUK3 1230 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 BRMS1LQ5PSV4 323 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 NAA35Q5VZE5 725 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 RNF219Q5W0B1 726 aaPredicted RBP11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 KIAA0895LQ68EN5 471 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 NCEH1Q6PIU2 408 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 UNQ6494/PRO21346Q6UXR6 183 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 APTXQ7Z2E3 356 aaKnown RBP11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 PSMB7Q99436 277 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 FEM1AQ9BSK4 669 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 SCNM1Q9BWG6 230 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 STK33Q9BYT3 514 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 TKTL2Q9H0I9 626 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 VPS16Q9H269 839 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 HSD3B7Q9H2F3 369 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 GAREM1Q9H706 876 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 EBF2Q9HAK2 575 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 FAM207AQ9NSI2 230 aaPredicted RBP11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 FBXL12Q9NXK8 326 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 RRN3Q9NYV6 651 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 SLC12A6Q9UHW9 1150 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 TMEM59LQ9UK28 342 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 KLK13Q9UKR3 277 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 STAP1Q9ULZ2 295 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 TBC1D30Q9Y2I9 924 aa11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 TDRD6O60522 2096 aaKnown RBP11.54□□□□□ -0.56
RAB11FIP3-210ENST00000487899 COL27A1Q8IZC6 1860 aaPredicted RBP11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 CACNA1GO43497 2377 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 IGLV3-10A0A075B6K4 115 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 GOLGA8SH3BPF8 625 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 ATP9BO43861 1147 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 RNASEH2AO75792 299 aaKnown RBP11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 GFPT2O94808 682 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 ADH1BP00325 375 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 CYP1A1P04798 512 aaPredicted RBP11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 CHRNB2P17787 502 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 SLC8A1P32418 973 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 GALCP54803 685 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 SNX16P57768 344 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 RNASE9P60153 205 aaKnown RBP11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 PPP2CBP62714 309 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 PPP2CAP67775 309 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 SULT2A1Q06520 285 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 MTA1Q13330 715 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 RAB6CQ53S08 254 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 Q6ZVU0 165 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 RAB44Q7Z6P3 723 aaPredicted RBP11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 SH2D3CQ8N5H7 860 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 CPA5Q8WXQ8 436 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 RNF34Q969K3 372 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 C18orf8Q96DM3 657 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 CFAP57Q96MR6 1250 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 SLC6A18Q96N87 628 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 SPAG5Q96R06 1193 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 RAB6CQ9H0N0 254 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 METTL5Q9NRN9 209 aaKnown RBP11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 TM7SF3Q9NS93 570 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 FANCLQ9NW38 375 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 PCOLCE2Q9UKZ9 415 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 SARDHQ9UL12 918 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 NEU3Q9UQ49 428 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 HS3ST2Q9Y278 367 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 NEUROG3Q9Y4Z2 214 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 SNX11Q9Y5W9 270 aa11.53□□□□□ -0.56
RAB11FIP3-210ENST00000487899 A0A1W2PPC4 97 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 FAM47DPA6NHR8 397 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 LGALS16A8MUM7 142 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 PLK4O00444 970 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 RNASEH1O60930 286 aaKnown RBP11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 CLDN11O75508 207 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 PROS1P07225 676 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 SRCP12931 536 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 C5AR1P21730 350 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 MMP8P22894 467 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 SOX5P35711 763 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 CTSKP43235 329 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 CDH4P55283 916 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 POLR2FP61218 127 aaKnown RBP11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 CDR2Q01850 454 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 DEUP1Q05D60 604 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 NCAPHQ15003 741 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 AGBL4Q5VU57 503 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 IL27RAQ6UWB1 636 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 DBX2Q6ZNG2 339 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 ARCQ7LC44 396 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 TFAP2DQ7Z6R9 452 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 GLRX5Q86SX6 157 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 ERICH1Q86X53 443 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 ZNF677Q86XU0 584 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 EMC1Q8N766 993 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 OR2T34Q8NGX1 318 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 GBP4Q96PP9 640 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 SIK2Q9H0K1 926 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 NEUROG2Q9H2A3 272 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 PDCL3Q9H2J4 239 aa11.52□□□□□ -0.57
RAB11FIP3-210ENST00000487899 NLRC4Q9NPP4 1024 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms