RNA–Protein interactions for RNA: ENST00000487711.5

TTC3-220, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-220ENST00000487711 H3BNX3 289 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 PIP5K1CO60331 668 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 CCNT1O60563 726 aaKnown RBP4.45□□□□□ -1.7
TTC3-220ENST00000487711 NEURL1O76050 574 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 SYF2O95926 243 aaKnown RBP4.45□□□□□ -1.7
TTC3-220ENST00000487711 TK1P04183 234 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 LCKP06239 509 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 CHRNB1P11230 501 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 PSG1P11464 419 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 CYP4B1P13584 511 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 SCP2P22307 547 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 KLRC2P26717 231 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 PNPLA4P41247 253 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 CYP2J2P51589 502 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 ARL4CP56559 192 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 RHAGQ02094 409 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 ZBTB16Q05516 673 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 ZNF260Q3ZCT1 412 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 ZNF484Q5JVG2 852 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 IRF2BP2Q7Z5L9 587 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 IGFN1Q86VF2 1251 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 C2CD5Q86YS7 1000 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 SCN4BQ8IWT1 228 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 SUGP1Q8IWZ8 645 aaKnown RBP4.45□□□□□ -1.7
TTC3-220ENST00000487711 TMEM217Q8N7C4 229 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 SPPL3Q8TCT6 385 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 RILPL2Q969X0 211 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 SLC25A28Q96A46 364 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 RBM17Q96I25 401 aaKnown RBP4.45□□□□□ -1.7
TTC3-220ENST00000487711 PSMD1Q99460 953 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 ACAD9Q9H845 621 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 IL21RQ9HBE5 538 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 ZNF304Q9HCX3 659 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 SPAG4Q9NPE6 437 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 ITM2CQ9NQX7 267 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 FEM1BQ9UK73 627 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 DERAQ9Y315 318 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 SQORQ9Y6N5 450 aa4.45□□□□□ -1.7
TTC3-220ENST00000487711 MYMKA6NI61 221 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 B9A039 149 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 STX16-NPEPL1H3BU86 382 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 STX16O14662 325 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 HLA-DQA2P01906 255 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 CSF1P09603 554 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 TYK2P29597 1187 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 CCT4P50991 539 aaKnown RBP4.44□□□□□ -1.7
TTC3-220ENST00000487711 RPS6KA3P51812 740 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 TWIST1Q15672 202 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 FAM171A1Q5VUB5 890 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 LDHAL6AQ6ZMR3 332 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 TRAPPC11Q7Z392 1133 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 KDELC2Q7Z4H8 507 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 TMEM199Q8N511 208 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 LINS1Q8NG48 757 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 CEP70Q8NHQ1 597 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 C2CD4CQ8TF44 421 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 TMEM174Q8WUU8 243 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 MSI2Q96DH6 328 aaKnown RBP4.44□□□□□ -1.7
TTC3-220ENST00000487711 ISCA1Q9BUE6 129 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 HERC2P3Q9BVR0 1158 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.44□□□□□ -1.7
TTC3-220ENST00000487711 FZD3Q9NPG1 666 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 SLC22A11Q9NSA0 550 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 ZBTB40Q9NUA8 1239 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 THAP1Q9NVV9 213 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 TMEM248Q9NWD8 314 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 RRP7AQ9Y3A4 280 aaKnown RBP4.44□□□□□ -1.7
TTC3-220ENST00000487711 PCDHGB3Q9Y5G1 929 aa4.44□□□□□ -1.7
TTC3-220ENST00000487711 ATG13O75143 517 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 EPN2O95208 641 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 AVPR2P30518 371 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 SLC16A2P36021 539 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 PAPOLAP51003 745 aaKnown RBP4.43□□□□□ -1.7
TTC3-220ENST00000487711 THOC5Q13769 683 aaKnown RBP4.43□□□□□ -1.7
TTC3-220ENST00000487711 PTGR1Q14914 329 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 PRTGQ2VWP7 1150 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 PLK5Q496M5 336 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 C5orf22Q49AR2 442 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 CTXN3Q4LDR2 81 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 EPHA10Q5JZY3 1008 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 ENTPD8Q5MY95 495 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 NUGGCQ68CJ6 796 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 AWAT2Q6E213 333 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 TTLL5Q6EMB2 1281 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 GALNT7Q86SF2 657 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 BRSK2Q8IWQ3 736 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 SLC25A41Q8N5S1 370 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 ANKRD44Q8N8A2 993 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 VCPIP1Q96JH7 1222 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 SCLT1Q96NL6 688 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 CADM1Q9BY67 442 aaKnown RBP4.43□□□□□ -1.7
TTC3-220ENST00000487711 FRMD8Q9BZ67 464 aaPredicted RBP4.43□□□□□ -1.7
TTC3-220ENST00000487711 TASP1Q9H6P5 420 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 ACTR5Q9H9F9 607 aaPredicted RBP4.43□□□□□ -1.7
TTC3-220ENST00000487711 Q9N2J8 555 aa4.43□□□□□ -1.7
TTC3-220ENST00000487711 TMEM247A6NEH6 219 aa4.42□□□□□ -1.7
TTC3-220ENST00000487711 B4DGG1 531 aa4.42□□□□□ -1.7
TTC3-220ENST00000487711 TPD52L2O43399 206 aaKnown RBP4.42□□□□□ -1.7
TTC3-220ENST00000487711 FCGR2AP12318 317 aa4.42□□□□□ -1.7
TTC3-220ENST00000487711 TNNT1P13805 278 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms