RNA–Protein interactions for RNA: ENST00000487709.1

HMGB1P36-201, Transcript of high mobility group box 1 pseudogene 36, humanhuman

BASIC

Gene HMGB1P36, Length 576 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P36-201ENST00000487709 C10orf76Q5T2E6 689 aa4.13□□□□□ -1.75
HMGB1P36-201ENST00000487709 ATG16L1Q676U5 607 aa4.13□□□□□ -1.75
HMGB1P36-201ENST00000487709 KLBQ86Z14 1044 aa4.13□□□□□ -1.75
HMGB1P36-201ENST00000487709 TEX19Q8NA77 164 aa4.13□□□□□ -1.75
HMGB1P36-201ENST00000487709 PIGOQ8TEQ8 1089 aa4.13□□□□□ -1.75
HMGB1P36-201ENST00000487709 ZFPM2Q8WW38 1151 aa4.13□□□□□ -1.75
HMGB1P36-201ENST00000487709 NCSTNQ92542 709 aa4.13□□□□□ -1.75
HMGB1P36-201ENST00000487709 FCRL5Q96RD9 977 aa4.13□□□□□ -1.75
HMGB1P36-201ENST00000487709 CD180Q99467 661 aa4.13□□□□□ -1.75
HMGB1P36-201ENST00000487709 EFHD1Q9BUP0 239 aa4.13□□□□□ -1.75
HMGB1P36-201ENST00000487709 UNC45AQ9H3U1 944 aa4.13□□□□□ -1.75
HMGB1P36-201ENST00000487709 ZHX3Q9H4I2 956 aa4.13□□□□□ -1.75
HMGB1P36-201ENST00000487709 PLEKHA2Q9HB19 425 aa4.13□□□□□ -1.75
HMGB1P36-201ENST00000487709 ALKBH4Q9NXW9 302 aa4.13□□□□□ -1.75
HMGB1P36-201ENST00000487709 SEMA5BQ9P283 1151 aa4.13□□□□□ -1.75
HMGB1P36-201ENST00000487709 PDP2Q9P2J9 529 aa4.13□□□□□ -1.75
HMGB1P36-201ENST00000487709 ZNF112Q9UJU3 913 aa4.13□□□□□ -1.75
HMGB1P36-201ENST00000487709 PROCRQ9UNN8 238 aa4.13□□□□□ -1.75
HMGB1P36-201ENST00000487709 LZTS1Q9Y250 596 aa4.13□□□□□ -1.75
HMGB1P36-201ENST00000487709 FAM90A20PA6NIJ5 464 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 B9A039 149 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 MCIDASD6RGH6 385 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 KLK10O43240 276 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 KIF1CO43896 1103 aaKnown RBP4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 PRF1P14222 555 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 RPS6KB1P23443 525 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 PAX3P23760 479 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 PRKCHP24723 683 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 CNTFP26441 200 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 KRT9P35527 623 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 PSMC2P35998 433 aaKnown RBP4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 PGM1P36871 562 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 GPD2P43304 727 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 HTR6P50406 440 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 NANOS2P60321 138 aaKnown RBP4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 B4GALNT1Q00973 533 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 GALNT3Q14435 633 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 RBMS2Q15434 407 aaKnown RBP4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 SLC9C1Q4G0N8 1177 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 ZNF484Q5JVG2 852 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 CBWD5Q5RIA9 395 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 JAKMIP3Q5VZ66 844 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 RBM44Q6ZP01 1051 aaKnown RBP4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 CYB5R4Q7L1T6 521 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 IGFN1Q86VF2 1251 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 HERC6Q8IVU3 1022 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 C16orf52Q8NHV5 167 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 BCAS4Q8TDM0 211 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 RILPL2Q969X0 211 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 KAZALD1Q96I82 304 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 TWNKQ96RR1 684 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 IFT27Q9BW83 186 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 OSBPL5Q9H0X9 879 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 FOXP1Q9H334 677 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 ABHD16BQ9H3Z7 469 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 WASH6PQ9NQA3 447 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 C9orf78Q9NZ63 289 aaPredicted RBP4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 GJD2Q9UKL4 321 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 DHDHQ9UQ10 334 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 DNAJC16Q9Y2G8 782 aa4.12□□□□□ -1.75
HMGB1P36-201ENST00000487709 FNDC1Q4ZHG4 1894 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 VWA3AA6NCI4 1184 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 CD8B2A6NJW9 211 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 F8W810 466 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 HOXC11O43248 304 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 MSI1O43347 362 aaKnown RBP4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 NFATC1O95644 943 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 PLAUP00749 431 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 TMEM191BP0C7N4 346 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 PKMP14618 531 aaKnown RBP4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 CHRNA5P30532 468 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 ARL1P40616 181 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 SKIV2L2P42285 1042 aaKnown RBP4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 ZNF84P51523 738 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 SHC2P98077 582 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 CHRNDQ07001 517 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 KHDRBS1Q07666 443 aaKnown RBP eCLIP4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 DLGAP5Q15398 846 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 GPR68Q15743 365 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 KRTAP27-1Q3LI81 207 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 AWAT1Q58HT5 328 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 LRRC8DQ7L1W4 858 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 GALNT7Q86SF2 657 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 RHPN2Q8IUC4 686 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 SUGP1Q8IWZ8 645 aaKnown RBP4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 ADGRF4Q8IZF3 695 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 ADGRF3Q8IZF5 1079 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 ESX1Q8N693 406 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 ZBTB8BQ8NAP8 495 aaPredicted RBP4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 OR52N4Q8NGI2 321 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 CLEC4CQ8WTT0 213 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 HERVK_113Q902F9 699 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 COQ8BQ96D53 544 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 P2RY11Q96G91 374 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 VCPIP1Q96JH7 1222 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 MAELQ96JY0 434 aaKnown RBP4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 SEC62Q99442 399 aaKnown RBP4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 REEP2Q9BRK0 252 aa4.11□□□□□ -1.75
HMGB1P36-201ENST00000487709 GPR63Q9BZJ6 419 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms