RNA–Protein interactions for RNA: ENST00000487401.1

SREBF1-215, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 2

Gene SREBF1, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-215	ENST00000487401	DLG2	Q15700	870 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	FAM102A	Q5T9C2	384 aa	Predicted RBP	12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	TBC1D3G	Q6DHY5	549 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	TBC1D3C	Q6IPX1	549 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	DPY19L2P1	Q6NXN4	242 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	LAYN	Q6UX15	382 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	GLRX5	Q86SX6	157 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	TBC1D3	Q8IZP1	549 aa	Predicted RBP	12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	AADAT	Q8N5Z0	425 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	FRS2	Q8WU20	508 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	ADAMTS14	Q8WXS8	1223 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	SLC6A18	Q96N87	628 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	NPY6R	Q99463	290 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	PIGV	Q9NUD9	493 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	ARHGEF38	Q9NXL2	777 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	TAB2	Q9NYJ8	693 aa		12.8	□□□□□ -0.36
SREBF1-215	ENST00000487401	FAM170A	A1A519	330 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	FAM221B	A6H8Z2	402 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	GOLGA8CP	A6NN73	597 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	C1QTNF3-AMACR	E9PGA6	284 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401		H0Y8X5	98 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	GOLGA8S	H3BPF8	625 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	ATP9B	O43861	1147 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	BNIP3L	O60238	219 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	RHOC	P08134	193 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	CDH5	P33151	784 aa	Predicted RBP	12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	SCNN1A	P37088	669 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	GRK6	P43250	576 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	IRAK1	P51617	712 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	INAVA	Q3KP66	663 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	SLC25A52	Q3SY17	297 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	SLC45A4	Q5BKX6	768 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	ACBD5	Q5T8D3	534 aa	Predicted RBP	12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	DBX2	Q6ZNG2	339 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	PRPF39	Q86UA1	669 aa	Known RBP	12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	SLCO6A1	Q86UG4	719 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	XYLT1	Q86Y38	959 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	ENOX1	Q8TC92	643 aa	Known RBP	12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	ZCCHC14	Q8WYQ9	949 aa	Known RBP	12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	ALG14	Q96F25	216 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	PGAP3	Q96FM1	320 aa	Predicted RBP	12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	SERAC1	Q96JX3	654 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	C1orf74	Q96LT6	269 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	TBCB	Q99426	244 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	ORAI3	Q9BRQ5	295 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	NAA15	Q9BXJ9	866 aa	Known RBP	12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	TMEM121B	Q9BXQ6	578 aa	Predicted RBP	12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	TBC1D30	Q9Y2I9	924 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	FARP1	Q9Y4F1	1045 aa	Predicted RBP	12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	OR51B4	Q9Y5P0	310 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401	MYH10	P35580	1976 aa		12.79	□□□□□ -0.36
SREBF1-215	ENST00000487401		F8VZ95	297 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	SLC7A4	O43246	635 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	PCDHGA12	O60330	932 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	CNTN5	O94779	1100 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	TFE3	P19532	575 aa	Predicted RBP	12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	CD38	P28907	300 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	ADPRH	P54922	357 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	IL9R	Q01113	521 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	C5orf22	Q49AR2	442 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	KCNT1	Q5JUK3	1230 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	FKBP15	Q5T1M5	1219 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	C6orf118	Q5T5N4	469 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	OTUD1	Q5VV17	481 aa	Predicted RBP	12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	NAA35	Q5VZE5	725 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	NOP9	Q86U38	636 aa	Known RBP	12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	SH2D3C	Q8N5H7	860 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	ATP11C	Q8NB49	1132 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	OR52K2	Q8NGK3	314 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	CPA5	Q8WXQ8	436 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	NT5C3B	Q969T7	300 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	CCDC114	Q96M63	670 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	C2orf49	Q9BVC5	232 aa	Predicted RBP	12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	VPS16	Q9H269	839 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	KDM4C	Q9H3R0	1056 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	EBF2	Q9HAK2	575 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	PPM1H	Q9ULR3	514 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	BTBD3	Q9Y2F9	522 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	SNX10	Q9Y5X0	201 aa		12.78	□□□□□ -0.36
SREBF1-215	ENST00000487401	ZFHX4	Q86UP3	3567 aa		12.77	□□□□□ -0.36
SREBF1-215	ENST00000487401	DRGX	A6NNA5	263 aa		12.77	□□□□□ -0.37
SREBF1-215	ENST00000487401	PLK4	O00444	970 aa		12.77	□□□□□ -0.37
SREBF1-215	ENST00000487401	MCF2L	O15068	1137 aa		12.77	□□□□□ -0.37
SREBF1-215	ENST00000487401	ALOX15B	O15296	676 aa		12.77	□□□□□ -0.37
SREBF1-215	ENST00000487401	TNFSF14	O43557	240 aa		12.77	□□□□□ -0.37
SREBF1-215	ENST00000487401	SRGAP2	O75044	1071 aa		12.77	□□□□□ -0.37
SREBF1-215	ENST00000487401	RTN2	O75298	545 aa		12.77	□□□□□ -0.37
SREBF1-215	ENST00000487401	GFPT2	O94808	682 aa		12.77	□□□□□ -0.37
SREBF1-215	ENST00000487401	MME	P08473	750 aa		12.77	□□□□□ -0.37
SREBF1-215	ENST00000487401	ATXN1L	P0C7T5	689 aa	Known RBP	12.77	□□□□□ -0.37
SREBF1-215	ENST00000487401	NUDT1	P36639	197 aa		12.77	□□□□□ -0.37
SREBF1-215	ENST00000487401	CCDC15	Q0P6D6	951 aa		12.77	□□□□□ -0.37
SREBF1-215	ENST00000487401	POM121L1P	Q3SYA9	428 aa		12.77	□□□□□ -0.37
SREBF1-215	ENST00000487401	ALF	Q53S48	1182 aa		12.77	□□□□□ -0.37
SREBF1-215	ENST00000487401	C2CD6	Q53TS8	623 aa		12.77	□□□□□ -0.37
SREBF1-215	ENST00000487401	PRAMEF14	Q5SWL7	426 aa		12.77	□□□□□ -0.37
SREBF1-215	ENST00000487401		Q6ZVU0	165 aa		12.77	□□□□□ -0.37
SREBF1-215	ENST00000487401	TFAP2D	Q7Z6R9	452 aa		12.77	□□□□□ -0.37
SREBF1-215	ENST00000487401	SETD3	Q86TU7	594 aa	Predicted RBP	12.77	□□□□□ -0.37
SREBF1-215	ENST00000487401	ZNF677	Q86XU0	584 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms