RNA–Protein interactions for RNA: ENST00000487215.1

SMPDL3A-202, Transcript of sphingomyelin phosphodiesterase acid like 3A, humanhuman

TSL 2

Gene SMPDL3A, Length 903 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3A-202ENST00000487215 ARHGEF19Q8IW93 802 aa20.04■□□□□ 0.8
SMPDL3A-202ENST00000487215 CCAR2Q8N163 923 aaKnown RBP20.04■□□□□ 0.8
SMPDL3A-202ENST00000487215 PRMT1Q99873 361 aaKnown RBP20.04■□□□□ 0.8
SMPDL3A-202ENST00000487215 TRIM62Q9BVG3 475 aa20.04■□□□□ 0.8
SMPDL3A-202ENST00000487215 SHROOM3Q8TF72 1996 aa20.04■□□□□ 0.8
SMPDL3A-202ENST00000487215 TRIM38O00635 465 aa20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 SIGLEC6O43699 453 aa20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 TRUB2O95900 331 aaKnown RBP20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 ACTN2P35609 894 aa20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 ACADSBP45954 432 aa20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 PLK1P53350 603 aa20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 PITX1P78337 314 aaPredicted RBP20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 TLE3Q04726 772 aa20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 CNTN1Q12860 1018 aa20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 STAT4Q14765 748 aa20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 TBC1D25Q3MII6 688 aa20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 AGBL4Q5VU57 503 aa20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 CXorf57Q6NSI4 855 aaKnown RBP20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 DENND1BQ6P3S1 775 aa20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 GPR155Q7Z3F1 870 aa20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 DSG4Q86SJ6 1040 aa20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 ERICH1Q86X53 443 aa20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 OR8D1Q8WZ84 308 aa20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 GSDMAQ96QA5 445 aa20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 GDPD2Q9HCC8 539 aa20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 CA5BQ9Y2D0 317 aa20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 ATP6V1DQ9Y5K8 247 aa20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 MYLKQ15746 1914 aa20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 SETXQ7Z333 2677 aaKnown RBP20.03■□□□□ 0.8
SMPDL3A-202ENST00000487215 KALRNO60229 2985 aa20.02■□□□□ 0.8
SMPDL3A-202ENST00000487215 KCNU1A8MYU2 1149 aa20.02■□□□□ 0.8
SMPDL3A-202ENST00000487215 GCNT1Q02742 428 aa20.02■□□□□ 0.8
SMPDL3A-202ENST00000487215 CCDC173Q0VFZ6 552 aa20.02■□□□□ 0.8
SMPDL3A-202ENST00000487215 EIF4EBP2Q13542 120 aaPredicted RBP20.02■□□□□ 0.8
SMPDL3A-202ENST00000487215 POM121L1PQ3SYA9 428 aa20.02■□□□□ 0.8
SMPDL3A-202ENST00000487215 SETMARQ53H47 684 aaPredicted RBP20.02■□□□□ 0.8
SMPDL3A-202ENST00000487215 FAM46CQ5VWP2 391 aa20.02■□□□□ 0.8
SMPDL3A-202ENST00000487215 ATP6V0D2Q8N8Y2 350 aa20.02■□□□□ 0.8
SMPDL3A-202ENST00000487215 ERCC4Q92889 916 aaPredicted RBP20.02■□□□□ 0.8
SMPDL3A-202ENST00000487215 SLC4A5Q9BY07 1137 aa20.02■□□□□ 0.8
SMPDL3A-202ENST00000487215 POPDC2Q9HBU9 364 aa20.02■□□□□ 0.8
SMPDL3A-202ENST00000487215 PPM1HQ9ULR3 514 aa20.02■□□□□ 0.8
SMPDL3A-202ENST00000487215 TEX51A0A1B0GUA7 166 aa20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 A0A1B0GVM2 712 aa20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 TCAF2A6NFQ2 919 aa20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 E5RJQ4 531 aa20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 PRAMEF26H0Y7S4 382 aa20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 ATP9BO43861 1147 aa20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 MT-CO3P00414 261 aa20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 VASPP50552 380 aaPredicted RBP20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 CETN1Q12798 172 aa20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 ZNF211Q13398 564 aaPredicted RBP20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 ACCSLQ4AC99 568 aa20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 CCDC40Q4G0X9 1142 aa20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 TTC39BQ5VTQ0 682 aaPredicted RBP20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 KDM7AQ6ZMT4 941 aa20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 SPACA3Q8IXA5 215 aa20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 FMR1NBQ8N0W7 255 aaPredicted RBP20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 SLC25A45Q8N413 288 aa20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 ZNF843Q8N446 348 aa20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 STK32AQ8WU08 396 aa20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 ALG14Q96F25 216 aa20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 CEP63Q96MT8 703 aa20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 KREMEN1Q96MU8 473 aa20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 PTPRQQ9UMZ3 2332 aa20.01■□□□□ 0.79
SMPDL3A-202ENST00000487215 C1QTNF3-AMACRE9PGA6 284 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 P4HA2O15460 535 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 PLA2G2AP14555 144 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 OXCT1P55809 520 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 TAS2R38P59533 333 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 YWHAZP63104 245 aaKnown RBP20■□□□□ 0.79
SMPDL3A-202ENST00000487215 CXADRP78310 365 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 DAB2P98082 770 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 E2F1Q01094 437 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 CENPCQ03188 943 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 RABGAP1LQ5R372 815 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 PCSK4Q6UW60 755 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 Q6ZVU0 165 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 TMEM145Q8NBT3 493 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 OR52K2Q8NGK3 314 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 SPATA20Q8TB22 786 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 KLHDC7BQ96G42 594 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 PREBQ9HCU5 417 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 SLC12A6Q9UHW9 1150 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 SLC25A13Q9UJS0 675 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 CNTN6Q9UQ52 1028 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 PCDHB1Q9Y5F3 818 aa20■□□□□ 0.79
SMPDL3A-202ENST00000487215 MCF2LO15068 1137 aa19.99■□□□□ 0.79
SMPDL3A-202ENST00000487215 ALOX15BO15296 676 aa19.99■□□□□ 0.79
SMPDL3A-202ENST00000487215 SMC2O95347 1197 aa19.99■□□□□ 0.79
SMPDL3A-202ENST00000487215 KRT5P13647 590 aa19.99■□□□□ 0.79
SMPDL3A-202ENST00000487215 DGKAP23743 735 aa19.99■□□□□ 0.79
SMPDL3A-202ENST00000487215 IRAK1P51617 712 aa19.99■□□□□ 0.79
SMPDL3A-202ENST00000487215 TAF5Q15542 800 aa19.99■□□□□ 0.79
SMPDL3A-202ENST00000487215 DLG2Q15700 870 aa19.99■□□□□ 0.79
SMPDL3A-202ENST00000487215 MEA1Q16626 185 aa19.99■□□□□ 0.79
SMPDL3A-202ENST00000487215 FBXL22Q6P050 247 aa19.99■□□□□ 0.79
SMPDL3A-202ENST00000487215 TMEM110Q86TL2 294 aa19.99■□□□□ 0.79
SMPDL3A-202ENST00000487215 EHBP1Q8NDI1 1231 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms