RNA–Protein interactions for RNA: ENST00000487026.5

LIME1-206, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LIME1, Length 805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-206ENST00000487026 ADH1BP00325 375 aa25.25■■□□□ 1.63
LIME1-206ENST00000487026 C5AR1P21730 350 aa25.25■■□□□ 1.63
LIME1-206ENST00000487026 CTSKP43235 329 aa25.25■■□□□ 1.63
LIME1-206ENST00000487026 SULT1E1P49888 294 aa25.25■■□□□ 1.63
LIME1-206ENST00000487026 OXCT1P55809 520 aa25.25■■□□□ 1.63
LIME1-206ENST00000487026 RACK1P63244 317 aaKnown RBP25.25■■□□□ 1.63
LIME1-206ENST00000487026 IL9RQ01113 521 aa25.25■■□□□ 1.63
LIME1-206ENST00000487026 ELAVL3Q14576 367 aaKnown RBP25.25■■□□□ 1.63
LIME1-206ENST00000487026 ZDHHC17Q8IUH5 632 aa25.25■■□□□ 1.63
LIME1-206ENST00000487026 BAHD1Q8TBE0 780 aaPredicted RBP25.25■■□□□ 1.63
LIME1-206ENST00000487026 C18orf8Q96DM3 657 aa25.25■■□□□ 1.63
LIME1-206ENST00000487026 TMPRSS4Q9NRS4 437 aa25.25■■□□□ 1.63
LIME1-206ENST00000487026 VPS28Q9UK41 221 aa25.25■■□□□ 1.63
LIME1-206ENST00000487026 RALYQ9UKM9 306 aaKnown RBP25.25■■□□□ 1.63
LIME1-206ENST00000487026 SARDHQ9UL12 918 aa25.25■■□□□ 1.63
LIME1-206ENST00000487026 APOBEC2Q9Y235 224 aaKnown RBP25.25■■□□□ 1.63
LIME1-206ENST00000487026 OR51B4Q9Y5P0 310 aa25.25■■□□□ 1.63
LIME1-206ENST00000487026 PLXNA2O75051 1894 aa25.24■■□□□ 1.63
LIME1-206ENST00000487026 GOLGA8CPA6NN73 597 aa25.24■■□□□ 1.63
LIME1-206ENST00000487026 FLRT2O43155 660 aa25.24■■□□□ 1.63
LIME1-206ENST00000487026 WNT1P04628 370 aa25.24■■□□□ 1.63
LIME1-206ENST00000487026 UCHL3P15374 230 aa25.24■■□□□ 1.63
LIME1-206ENST00000487026 CDH5P33151 784 aaPredicted RBP25.24■■□□□ 1.63
LIME1-206ENST00000487026 GABRB2P47870 512 aa25.24■■□□□ 1.63
LIME1-206ENST00000487026 CXCR3P49682 368 aa25.24■■□□□ 1.63
LIME1-206ENST00000487026 C21orf59P57076 290 aa25.24■■□□□ 1.63
LIME1-206ENST00000487026 SUZ12Q15022 739 aaKnown RBP25.24■■□□□ 1.63
LIME1-206ENST00000487026 DLG2Q15700 870 aa25.24■■□□□ 1.63
LIME1-206ENST00000487026 TCP11X2Q5H9J9 407 aa25.24■■□□□ 1.63
LIME1-206ENST00000487026 FAM102AQ5T9C2 384 aaPredicted RBP25.24■■□□□ 1.63
LIME1-206ENST00000487026 LRSAM1Q6UWE0 723 aa25.24■■□□□ 1.63
LIME1-206ENST00000487026 GLRX5Q86SX6 157 aa25.24■■□□□ 1.63
LIME1-206ENST00000487026 NOP9Q86U38 636 aaKnown RBP25.24■■□□□ 1.63
LIME1-206ENST00000487026 ERICH1Q86X53 443 aa25.24■■□□□ 1.63
LIME1-206ENST00000487026 XYLT1Q86Y38 959 aa25.24■■□□□ 1.63
LIME1-206ENST00000487026 ZCCHC14Q8WYQ9 949 aaKnown RBP25.24■■□□□ 1.63
LIME1-206ENST00000487026 SPAG5Q96R06 1193 aa25.24■■□□□ 1.63
LIME1-206ENST00000487026 TBCBQ99426 244 aa25.24■■□□□ 1.63
LIME1-206ENST00000487026 ARHGEF38Q9NXL2 777 aa25.24■■□□□ 1.63
LIME1-206ENST00000487026 TAB2Q9NYJ8 693 aa25.24■■□□□ 1.63
LIME1-206ENST00000487026 SLC25A13Q9UJS0 675 aa25.24■■□□□ 1.63
LIME1-206ENST00000487026 TBC1D3DA0A087WVF3 549 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 TBC1D3IA0A087WXS9 549 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 TBC1D3EA0A087X179 549 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 TBC1D3KA0A087X1G2 549 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 TMEM8BA6NDV4 472 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 TBC1D3FA6NER0 549 aaPredicted RBP25.23■■□□□ 1.63
LIME1-206ENST00000487026 TBC1D3LB9A6J9 549 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 GOLGA8SH3BPF8 625 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 BNIP3LO60238 219 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 CLDN11O75508 207 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 ATXN1LP0C7T5 689 aaKnown RBP25.23■■□□□ 1.63
LIME1-206ENST00000487026 TBC1D3HP0C7X1 549 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 DRD3P35462 400 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 ADPRHP54922 357 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 DEUP1Q05D60 604 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 POM121L1PQ3SYA9 428 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 C5orf22Q49AR2 442 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 ALFQ53S48 1182 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 TBC1D3GQ6DHY5 549 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 TBC1D3CQ6IPX1 549 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 TBC1D3Q8IZP1 549 aaPredicted RBP25.23■■□□□ 1.63
LIME1-206ENST00000487026 NT5C3BQ969T7 300 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 PPP1R9BQ96SB3 815 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 ACE2Q9BYF1 805 aaPredicted RBP25.23■■□□□ 1.63
LIME1-206ENST00000487026 MUC3BQ9H195 1237 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 AASDHPPTQ9NRN7 309 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 RRN3Q9NYV6 651 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 STAP1Q9ULZ2 295 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 TBC1D30Q9Y2I9 924 aa25.23■■□□□ 1.63
LIME1-206ENST00000487026 VILLO15195 856 aa25.22■■□□□ 1.63
LIME1-206ENST00000487026 ATP9BO43861 1147 aa25.22■■□□□ 1.63
LIME1-206ENST00000487026 RTN2O75298 545 aa25.22■■□□□ 1.63
LIME1-206ENST00000487026 MMEP08473 750 aa25.22■■□□□ 1.63
LIME1-206ENST00000487026 CCR5P51681 352 aa25.22■■□□□ 1.63
LIME1-206ENST00000487026 CDH4P55283 916 aa25.22■■□□□ 1.63
LIME1-206ENST00000487026 MTA1Q13330 715 aa25.22■■□□□ 1.63
LIME1-206ENST00000487026 CPA5Q8WXQ8 436 aa25.22■■□□□ 1.63
LIME1-206ENST00000487026 OR8D1Q8WZ84 308 aa25.22■■□□□ 1.63
LIME1-206ENST00000487026 CDC6Q99741 560 aa25.22■■□□□ 1.63
LIME1-206ENST00000487026 STK33Q9BYT3 514 aa25.22■■□□□ 1.63
LIME1-206ENST00000487026 LMBRD1Q9NUN5 540 aa25.22■■□□□ 1.63
LIME1-206ENST00000487026 C10orf142B7Z368 130 aa25.21■■□□□ 1.63
LIME1-206ENST00000487026 MT-CO1P00395 513 aa25.21■■□□□ 1.63
LIME1-206ENST00000487026 ZNF18P17022 549 aa25.21■■□□□ 1.63
LIME1-206ENST00000487026 EEF1GP26641 437 aaKnown RBP25.21■■□□□ 1.63
LIME1-206ENST00000487026 FLT3P36888 993 aa25.21■■□□□ 1.63
LIME1-206ENST00000487026 KLK7P49862 253 aa25.21■■□□□ 1.63
LIME1-206ENST00000487026 CCT8P50990 548 aa25.21■■□□□ 1.63
LIME1-206ENST00000487026 PPP2CBP62714 309 aa25.21■■□□□ 1.63
LIME1-206ENST00000487026 PPP2CAP67775 309 aa25.21■■□□□ 1.63
LIME1-206ENST00000487026 SLC25A52Q3SY17 297 aa25.21■■□□□ 1.63
LIME1-206ENST00000487026 BRMS1LQ5PSV4 323 aa25.21■■□□□ 1.63
LIME1-206ENST00000487026 Q6ZVU0 165 aa25.21■■□□□ 1.63
LIME1-206ENST00000487026 ZNF683Q8IZ20 524 aa25.21■■□□□ 1.63
LIME1-206ENST00000487026 VPS16Q9H269 839 aa25.21■■□□□ 1.63
LIME1-206ENST00000487026 TOR4AQ9NXH8 423 aa25.21■■□□□ 1.63
LIME1-206ENST00000487026 MPP6Q9NZW5 540 aa25.21■■□□□ 1.63
LIME1-206ENST00000487026 NYNRINQ9P2P1 1898 aaKnown RBP25.21■■□□□ 1.63
LIME1-206ENST00000487026 SRRM3A6NNA2 597 aaPredicted RBP25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms