RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 CFAP36Q96G28 342 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 PI4K2AQ9BTU6 479 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 GTPBP2Q9BX10 602 aaKnown RBP7.13□□□□□ -1.27
HDAC3-209ENST00000486618 CCSER1Q9C0I3 900 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 HAPLN2Q9GZV7 340 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 CLEC4MQ9H2X3 399 aaPredicted RBP7.13□□□□□ -1.27
HDAC3-209ENST00000486618 KCNF1Q9H3M0 494 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 ASB7Q9H672 318 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 CCDC86Q9H6F5 360 aaKnown RBP7.13□□□□□ -1.27
HDAC3-209ENST00000486618 FBRSQ9HAH7 460 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 ABCB6Q9NP58 842 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 NPHS2Q9NP85 383 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 FANCFQ9NPI8 374 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 KRT82Q9NSB4 513 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 TMEM74BQ9NUR3 256 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 KCND2Q9NZV8 630 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 PILRBQ9UKJ0 227 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 DMTF1Q9Y222 760 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 MYOFQ9NZM1 2061 aa7.13□□□□□ -1.27
HDAC3-209ENST00000486618 TNRC6BQ9UPQ9 1833 aaKnown RBP7.13□□□□□ -1.27
HDAC3-209ENST00000486618 HELZ2Q9BYK8 2649 aaKnown RBP7.13□□□□□ -1.27
HDAC3-209ENST00000486618 A0A1B0GVC2 190 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 LINC00854A0A1B0GVQ3 168 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 KPNA7A9QM74 516 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 H0YC42 278 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 PLOD2O00469 737 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 LAD1O00515 517 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 SLC9A3R1O14745 358 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-209ENST00000486618 JAK2O60674 1132 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 NOL4O94818 638 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 TIAF1O95411 115 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 PIGRP01833 764 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 CAPNS1P04632 268 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 APODP05090 189 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 HSD3B1P14060 373 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 STMN1P16949 149 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 PFKLP17858 780 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 ITPKAP23677 461 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 CDC25AP30304 524 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 SSTR4P31391 388 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 OPRD1P41143 372 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 PNPLA4P41247 253 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 PTGER3P43115 390 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 CDR1P51861 262 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 NCKAP1LP55160 1127 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 SLC7A5Q01650 507 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 GUCY1B3Q02153 619 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 NSUN2Q08J23 767 aaKnown RBP eCLIP7.12□□□□□ -1.27
HDAC3-209ENST00000486618 BECN1Q14457 450 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 TRIP6Q15654 476 aaKnown RBP7.12□□□□□ -1.27
HDAC3-209ENST00000486618 DDR2Q16832 855 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 C21orf62-AS1Q17RA5 79 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 COL28A1Q2UY09 1125 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 SV2CQ496J9 727 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 WSCD1Q658N2 575 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 TBC1D1Q86TI0 1168 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-209ENST00000486618 SLC44A2Q8IWA5 706 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-209ENST00000486618 FAM186BQ8IYM0 893 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 FAM26EQ8N5C1 309 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 MINDY1Q8N5J2 469 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 UBR7Q8N806 425 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 C4orf32Q8N8J7 132 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 ARL14EPQ8N8R7 260 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-209ENST00000486618 SYT2Q8N9I0 419 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-209ENST00000486618 DRAXINQ8NBI3 349 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-209ENST00000486618 TXNDC5Q8NBS9 432 aaKnown RBP7.12□□□□□ -1.27
HDAC3-209ENST00000486618 RASSF8Q8NHQ8 419 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 FNIP1Q8TF40 1166 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 LEO1Q8WVC0 666 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-209ENST00000486618 ADAMTS14Q8WXS8 1223 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 CCT6BQ92526 530 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 KCNN1Q92952 543 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 NAF1Q96HR8 494 aaKnown RBP7.12□□□□□ -1.27
HDAC3-209ENST00000486618 C8orf76Q96K31 380 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 FNBP1Q96RU3 617 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 CYP2S1Q96SQ9 504 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 PNKPQ96T60 521 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 MSTO1Q9BUK6 570 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 SLC13A1Q9BZW2 595 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 LINC00597Q9H2U6 94 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 CYP4F12Q9HCS2 524 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 PCMTD2Q9NV79 361 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 DPP3Q9NY33 737 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 NOL12Q9UGY1 213 aaKnown RBP eCLIP7.12□□□□□ -1.27
HDAC3-209ENST00000486618 MBD1Q9UIS9 605 aaPredicted RBP7.12□□□□□ -1.27
HDAC3-209ENST00000486618 CPSF3Q9UKF6 684 aaKnown RBP7.12□□□□□ -1.27
HDAC3-209ENST00000486618 PHTF1Q9UMS5 762 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 ARHGAP26Q9UNA1 814 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 TRAF3IP3Q9Y228 551 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 APOBEC2Q9Y235 224 aaKnown RBP7.12□□□□□ -1.27
HDAC3-209ENST00000486618 C2CD2Q9Y426 696 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 PCDHGB3Q9Y5G1 929 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 TSC2P49815 1807 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 KNL1Q8NG31 2342 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 CABIN1Q9Y6J0 2220 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 SPEGQ15772 3267 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 IGSF10Q6WRI0 2623 aa7.12□□□□□ -1.27
HDAC3-209ENST00000486618 SHROOM3Q8TF72 1996 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 A0A0B4J269 797 aa7.11□□□□□ -1.27
HDAC3-209ENST00000486618 CCDC66A2RUB6 948 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms