RNA–Protein interactions for RNA: ENST00000486530.1

HPS3-206, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 5

Gene HPS3, Length 1,894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-206ENST00000486530 CLIC5Q9NZA1 410 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 SLC12A4Q9UP95 1085 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 RPS6KL1Q9Y6S9 549 aa20.81■□□□□ 0.92
HPS3-206ENST00000486530 HMX2A2RU54 273 aa20.8■□□□□ 0.92
HPS3-206ENST00000486530 MTMR11A4FU01 709 aa20.8■□□□□ 0.92
HPS3-206ENST00000486530 WASH4PA8MWX3 477 aa20.8■□□□□ 0.92
HPS3-206ENST00000486530 H0YHG0 523 aa20.8■□□□□ 0.92
HPS3-206ENST00000486530 H7C4K7 107 aa20.8■□□□□ 0.92
HPS3-206ENST00000486530 CACNG3O60359 315 aa20.8■□□□□ 0.92
HPS3-206ENST00000486530 PSEN1P49768 467 aa20.8■□□□□ 0.92
HPS3-206ENST00000486530 TBX4P57082 545 aa20.8■□□□□ 0.92
HPS3-206ENST00000486530 GPR17Q13304 367 aa20.8■□□□□ 0.92
HPS3-206ENST00000486530 MROH9Q5TGP6 573 aa20.8■□□□□ 0.92
HPS3-206ENST00000486530 NAPEPLDQ6IQ20 393 aa20.8■□□□□ 0.92
HPS3-206ENST00000486530 TIGD7Q6NT04 549 aaPredicted RBP20.8■□□□□ 0.92
HPS3-206ENST00000486530 PACS1Q6VY07 963 aa20.8■□□□□ 0.92
HPS3-206ENST00000486530 LRRC49Q8IUZ0 686 aa20.8■□□□□ 0.92
HPS3-206ENST00000486530 UNC5BQ8IZJ1 945 aa20.8■□□□□ 0.92
HPS3-206ENST00000486530 TTC9BQ8N6N2 239 aa20.8■□□□□ 0.92
HPS3-206ENST00000486530 DIS3LQ8TF46 1054 aaKnown RBP20.8■□□□□ 0.92
HPS3-206ENST00000486530 FBXO32Q969P5 355 aa20.8■□□□□ 0.92
HPS3-206ENST00000486530 B3GALT6Q96L58 329 aa20.8■□□□□ 0.92
HPS3-206ENST00000486530 PPP1R12CQ9BZL4 782 aa20.8■□□□□ 0.92
HPS3-206ENST00000486530 MANSC1Q9H8J5 431 aa20.8■□□□□ 0.92
HPS3-206ENST00000486530 OLA1Q9NTK5 396 aaKnown RBP20.8■□□□□ 0.92
HPS3-206ENST00000486530 WDR91A4D1P6 747 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 USP12O75317 370 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 USP1O94782 785 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 PARNO95453 639 aaKnown RBP20.79■□□□□ 0.92
HPS3-206ENST00000486530 CCNB1P14635 433 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 DNAJB2P25686 324 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 NPY2RP49146 381 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 MLLT6P55198 1093 aaPredicted RBP20.79■□□□□ 0.92
HPS3-206ENST00000486530 ARPP19P56211 112 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 OLIG2Q13516 323 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 AFMIDQ63HM1 303 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 LINC00523Q86TU6 105 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 RASSF3Q86WH2 238 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 C2orf15Q8WU43 125 aaKnown RBP20.79■□□□□ 0.92
HPS3-206ENST00000486530 CERS2Q96G23 380 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 SPATA17Q96L03 361 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 PPP1R2P1Q96PQ5 205 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 IL12RB2Q99665 862 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 SLC39A8Q9C0K1 460 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 RXFP1Q9HBX9 757 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 COMMD8Q9NX08 183 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 PLLPQ9Y342 182 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 MICAL3Q7RTP6 2002 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 MATN3O15232 486 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 TBC1D4O60343 1298 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 GALTP07902 379 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 PIK3R6Q5UE93 754 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 FYB2Q5VWT5 728 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 FBXO46Q6PJ61 603 aaPredicted RBP20.79■□□□□ 0.92
HPS3-206ENST00000486530 ARHGAP36Q6ZRI8 547 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 ANKS3Q6ZW76 656 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 OTOAQ7RTW8 1153 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 TMEM135Q86UB9 458 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 CNTD1Q8N815 330 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 ACMSDQ8TDX5 336 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 TLR8Q9NR97 1041 aaKnown RBP20.79■□□□□ 0.92
HPS3-206ENST00000486530 ZFATQ9P243 1243 aa20.79■□□□□ 0.92
HPS3-206ENST00000486530 AAR2Q9Y312 384 aaKnown RBP20.79■□□□□ 0.92
HPS3-206ENST00000486530 MAGEB16A2A368 324 aa20.78■□□□□ 0.92
HPS3-206ENST00000486530 TBKBP1A7MCY6 615 aa20.78■□□□□ 0.92
HPS3-206ENST00000486530 MAFKO60675 156 aa20.78■□□□□ 0.92
HPS3-206ENST00000486530 HSPA1AP0DMV8 641 aaKnown RBP20.78■□□□□ 0.92
HPS3-206ENST00000486530 HSPA1BP0DMV9 641 aaKnown RBP20.78■□□□□ 0.92
HPS3-206ENST00000486530 SERPINB4P48594 390 aa20.78■□□□□ 0.92
HPS3-206ENST00000486530 CCDC15Q0P6D6 951 aa20.78■□□□□ 0.92
HPS3-206ENST00000486530 CDHR3Q6ZTQ4 885 aa20.78■□□□□ 0.92
HPS3-206ENST00000486530 C14orf80Q86SX3 495 aa20.78■□□□□ 0.92
HPS3-206ENST00000486530 LRRC43Q8N309 656 aa20.78■□□□□ 0.92
HPS3-206ENST00000486530 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.78■□□□□ 0.92
HPS3-206ENST00000486530 ZNF669Q96BR6 464 aaPredicted RBP20.78■□□□□ 0.92
HPS3-206ENST00000486530 RMDN2Q96LZ7 410 aa20.78■□□□□ 0.92
HPS3-206ENST00000486530 IL22Q9GZX6 179 aa20.78■□□□□ 0.92
HPS3-206ENST00000486530 PCMTD2Q9NV79 361 aa20.78■□□□□ 0.92
HPS3-206ENST00000486530 HCSTQ9UBK5 93 aa20.78■□□□□ 0.92
HPS3-206ENST00000486530 TBX21Q9UL17 535 aa20.78■□□□□ 0.92
HPS3-206ENST00000486530 USH1CQ9Y6N9 552 aa20.78■□□□□ 0.92
HPS3-206ENST00000486530 FAM237BA0A1B0GVD1 139 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 DNAJC8O75937 253 aaPredicted RBP20.77■□□□□ 0.92
HPS3-206ENST00000486530 HAPLN1P10915 354 aaPredicted RBP20.77■□□□□ 0.92
HPS3-206ENST00000486530 CRHR1P34998 444 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 EFEMP1Q12805 493 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 CDH17Q12864 832 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 MGAT5BQ3V5L5 792 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 RTP2Q5QGT7 225 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 DEFB128Q7Z7B8 93 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 ATP6V0D2Q8N8Y2 350 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 USP33Q8TEY7 942 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 VWCEQ96DN2 955 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 FCRL5Q96RD9 977 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 SEPT5Q99719 369 aaPredicted RBP20.77■□□□□ 0.92
HPS3-206ENST00000486530 MTPAPQ9NVV4 582 aaKnown RBP eCLIP20.77■□□□□ 0.92
HPS3-206ENST00000486530 DONSONQ9NYP3 566 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 TXNDC16Q9P2K2 825 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 ANXA9O76027 345 aa20.77■□□□□ 0.92
HPS3-206ENST00000486530 UBOX5O94941 541 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms