RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-208ENST00000486159 SLC47A2Q86VL8 602 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 TMPRSS6Q8IU80 811 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 SLC35G2Q8TBE7 412 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 DDI1Q8WTU0 396 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 SLC20A1Q8WUM9 679 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 HNRNPLLQ8WVV9 542 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 TSC1Q92574 1164 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 GATA6Q92908 595 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 TOE1Q96GM8 510 aaKnown RBP9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 ZNF419Q96HQ0 510 aaPredicted RBP9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 NAP1L3Q99457 506 aaPredicted RBP9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 CIPCQ9C0C6 399 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 PDCL3Q9H2J4 239 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 PRDM16Q9HAZ2 1276 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 ELOVL2Q9NXB9 296 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 WSB2Q9NYS7 404 aaPredicted RBP9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 TTC7AQ9ULT0 858 aaPredicted RBP9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 SLC27A6Q9Y2P4 619 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 PCDHB4Q9Y5E5 795 aa9.72□□□□□ -0.85
TMEM39A-208ENST00000486159 PCNX2A6NKB5 2137 aa9.71□□□□□ -0.85
TMEM39A-208ENST00000486159 O00370 1275 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 GFRA2O00451 464 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 ARHGAP33O14559 1287 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 XPO1O14980 1071 aaKnown RBP9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 NDUFS2O75306 463 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 GJB3O75712 270 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 CYP1A1P04798 512 aaPredicted RBP9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 SERPINF2P08697 491 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 BRD2P25440 801 aaKnown RBP9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 HOXD9P28356 352 aaPredicted RBP9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 CD6P30203 668 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 HLA-FP30511 346 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 SLC6A4P31645 630 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 TPMTP51580 245 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 ZNF132P52740 706 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 SIM1P81133 766 aaPredicted RBP9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 ENPP2Q13822 863 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 TRIP4Q15650 581 aaPredicted RBP9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 PLEKHG6Q3KR16 790 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 PREPLQ4J6C6 727 aaPredicted RBP9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 PKDCCQ504Y2 493 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 SPDYCQ5MJ68 293 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 WDR93Q6P2C0 686 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 RFWD3Q6PCD5 774 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 TMCO3Q6UWJ1 677 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 LAYNQ6UX15 382 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 NUDT18Q6ZVK8 323 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 DAAM2Q86T65 1068 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 NT5DC3Q86UY8 548 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 MARCH9Q86YJ5 346 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 FAM217AQ8IXS0 508 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 CHCHD4Q8N4Q1 142 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 ZCCHC9Q8N567 271 aaKnown RBP9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 PNPLA1Q8N8W4 532 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 LRRN4CLQ8ND94 238 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 ACTRT1Q8TDG2 376 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 HES6Q96HZ4 224 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 PCDHB18PQ96TA0 734 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 PARD6BQ9BYG5 372 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 ADAM33Q9BZ11 813 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 UBXN6Q9BZV1 441 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 THAP2Q9H0W7 228 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 ITM2CQ9NQX7 267 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 USP36Q9P275 1121 aaKnown RBP9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 NOL12Q9UGY1 213 aaKnown RBP eCLIP9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 V9GYY5 206 aaPredicted RBP9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 NUMA1Q14980 2115 aa9.71□□□□□ -0.86
TMEM39A-208ENST00000486159 MUC22E2RYF6 1773 aaPredicted RBP9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 CKAP5Q14008 2032 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 CCDC188H7C350 402 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 KCNK3O14649 394 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 MED7O43513 233 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 OPHN1O60890 802 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 ZNF217O75362 1048 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 FTCDO95954 541 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 FYNP06241 537 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 EPHX1P07099 455 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 MMEP08473 750 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 PAEPP09466 180 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 UNGP13051 313 aaPredicted RBP9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 NCAM1P13591 858 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 ABCB4P21439 1286 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 GNA15P30679 374 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 CHKAP35790 457 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 NSFP46459 744 aaKnown RBP9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 ATXN3P54252 364 aaPredicted RBP9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 DAOAP59103 153 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 CENPCQ03188 943 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 GRIK2Q13002 908 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 NAA30Q147X3 362 aaPredicted RBP9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 PTPRNQ16849 979 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 MAP9Q49MG5 647 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 SGO2Q562F6 1265 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 DCAF12L1Q5VU92 463 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 FBXO38Q6PIJ6 1188 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 TMEM270Q6UE05 265 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 ADIPOR2Q86V24 386 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 PHF13Q86YI8 300 aaPredicted RBP9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 CPXM2Q8N436 756 aa9.7□□□□□ -0.86
TMEM39A-208ENST00000486159 UBL4BQ8N7F7 174 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms