RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 RNASEH1O60930 286 aaKnown RBP7.21□□□□□ -1.26
VPS50-218ENST00000485994 NDUFS2O75306 463 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 PAGE1O75459 146 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 ADCY5O95622 1261 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 MOCS2O96007 188 aaPredicted RBP7.21□□□□□ -1.26
VPS50-218ENST00000485994 DNTTP04053 509 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 CALB1P05937 261 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 GZMAP12544 262 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 FERP16591 822 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 CSRP1P21291 193 aaKnown RBP7.21□□□□□ -1.26
VPS50-218ENST00000485994 ITPKAP23677 461 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 ADRA1BP35368 520 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 FLT3P36888 993 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 CSKP41240 450 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 ZNF165P49910 485 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 RNASE9P60153 205 aaKnown RBP7.21□□□□□ -1.26
VPS50-218ENST00000485994 RPS14P62263 151 aaKnown RBP7.21□□□□□ -1.26
VPS50-218ENST00000485994 SLC20A2Q08357 652 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 NME3Q13232 169 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 SLC14A1Q13336 389 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 ZNF177Q13360 481 aaPredicted RBP7.21□□□□□ -1.26
VPS50-218ENST00000485994 NR1I3Q14994 352 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 CLEC16AQ2KHT3 1053 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 ANO6Q4KMQ2 910 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 FILIP1LQ4L180 1135 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 TRIM61Q5EBN2 209 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 FIGNQ5HY92 759 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 FAM102AQ5T9C2 384 aaPredicted RBP7.21□□□□□ -1.26
VPS50-218ENST00000485994 TAF3Q5VWG9 929 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 DAB2IPQ5VWQ8 1189 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 IL31Q6EBC2 164 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 CXorf57Q6NSI4 855 aaKnown RBP7.21□□□□□ -1.26
VPS50-218ENST00000485994 TRNP1Q6NT89 227 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 LRRC31Q6UY01 552 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 ZNF783Q6ZMS7 281 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 APCDD1Q8J025 514 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 CFAP52Q8N1V2 620 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 AOPEPQ8N6M6 819 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 FRS2Q8WU20 508 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 CYB5D2Q8WUJ1 264 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 IGSF8Q969P0 613 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 FAM131CQ96AQ9 280 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 TOE1Q96GM8 510 aaKnown RBP7.21□□□□□ -1.26
VPS50-218ENST00000485994 PCDHB18PQ96TA0 734 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 TBCBQ99426 244 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 AGPAT1Q99943 283 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 SYT11Q9BT88 431 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 ZDHHC5Q9C0B5 715 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 TKTL2Q9H0I9 626 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 FAM204AQ9H8W3 233 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 NLRC4Q9NPP4 1024 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 TMEM9BQ9NQ34 198 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 ADAMTS1Q9UHI8 967 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 SLCO3A1Q9UIG8 710 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 CYP8B1Q9UNU6 501 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 NCKAP1Q9Y2A7 1128 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 DOCK9Q9BZ29 2069 aa7.21□□□□□ -1.26
VPS50-218ENST00000485994 ARID1BQ8NFD5 2236 aaPredicted RBP7.2□□□□□ -1.26
VPS50-218ENST00000485994 A0A1B0GTW7 788 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 ILVBLA1L0T0 632 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 DCDC2BA2VCK2 349 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 GJB3O75712 270 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 SYPP08247 313 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 KRT3P12035 628 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 ATP1A3P13637 1013 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 CEACAM1P13688 526 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 HLA-EP13747 358 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 GNSP15586 552 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 PDGFRAP16234 1089 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 TFE3P19532 575 aaPredicted RBP7.2□□□□□ -1.26
VPS50-218ENST00000485994 MZF1P28698 734 aaPredicted RBP7.2□□□□□ -1.26
VPS50-218ENST00000485994 RDXP35241 583 aaKnown RBP7.2□□□□□ -1.26
VPS50-218ENST00000485994 PRKCIP41743 596 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 NSFP46459 744 aaKnown RBP7.2□□□□□ -1.26
VPS50-218ENST00000485994 SULT1E1P49888 294 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 KRT83P78385 493 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 GFPT1Q06210 699 aaPredicted RBP7.2□□□□□ -1.26
VPS50-218ENST00000485994 CCDC6Q16204 474 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 SKOR2Q2VWA4 1001 aaPredicted RBP7.2□□□□□ -1.26
VPS50-218ENST00000485994 ARL13BQ3SXY8 428 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 CCDC14Q49A88 953 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 NAA35Q5VZE5 725 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 ZNF776Q68DI1 518 aaPredicted RBP7.2□□□□□ -1.26
VPS50-218ENST00000485994 ACAD10Q6JQN1 1059 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 CAVIN1Q6NZI2 390 aaKnown RBP7.2□□□□□ -1.26
VPS50-218ENST00000485994 KIAA1324Q6UXG2 1013 aaKnown RBP7.2□□□□□ -1.26
VPS50-218ENST00000485994 DBX2Q6ZNG2 339 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 C14orf80Q86SX3 495 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 C3orf20Q8ND61 904 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 SLC20A1Q8WUM9 679 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 RXFP2Q8WXD0 754 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 BAP1Q92560 729 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 NTAN1Q96AB6 310 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 IQCDQ96DY2 449 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 CFAP57Q96MR6 1250 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 RPRD1AQ96P16 312 aaPredicted RBP7.2□□□□□ -1.26
VPS50-218ENST00000485994 EDEM2Q9BV94 578 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 BTBD1Q9H0C5 482 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 SIK2Q9H0K1 926 aa7.2□□□□□ -1.26
VPS50-218ENST00000485994 SLC6A17Q9H1V8 727 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms