RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 ALFQ53S48 1182 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 DCAF6Q58WW2 860 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 ZC3H12AQ5D1E8 599 aaKnown RBP5.91□□□□□ -1.46
CUX1-208ENST00000485792 BRMS1LQ5PSV4 323 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 FAM72AQ5TYM5 149 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 GRAMD4Q6IC98 578 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 PLEKHA7Q6IQ23 1121 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 FAM72DQ6L9T8 149 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 TMEM214Q6NUQ4 689 aaKnown RBP5.91□□□□□ -1.46
CUX1-208ENST00000485792 SARM1Q6SZW1 724 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 LYSMD3Q7Z3D4 306 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 FAM72BQ86X60 149 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 MCOLN2Q8IZK6 566 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 CCDC33Q8N5R6 958 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 ALLCQ8N6M5 410 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 ZNF366Q8N895 744 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 ZNF557Q8N988 423 aaPredicted RBP5.91□□□□□ -1.46
CUX1-208ENST00000485792 C3orf20Q8ND61 904 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 RHBDD1Q8TEB9 315 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 FUBP1Q96AE4 644 aaKnown RBP5.91□□□□□ -1.46
CUX1-208ENST00000485792 ACDQ96AP0 544 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 FAM131CQ96AQ9 280 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 LOXL4Q96JB6 756 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 NSMCE3Q96MG7 304 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 CFAP57Q96MR6 1250 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 SPAG5Q96R06 1193 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 HAPLN3Q96S86 360 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 TBCBQ99426 244 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 PSMB7Q99436 277 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 HINFPQ9BQA5 517 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 C11orf70Q9BRQ4 267 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 NUP58Q9BVL2 599 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 RBSNQ9H1K0 784 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 TSPAN10Q9H1Z9 355 aaPredicted RBP5.91□□□□□ -1.46
CUX1-208ENST00000485792 SMOC1Q9H4F8 434 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 RETREG1Q9H6L5 497 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 METTL5Q9NRN9 209 aaKnown RBP5.91□□□□□ -1.46
CUX1-208ENST00000485792 DNAJC17Q9NVM6 304 aaKnown RBP5.91□□□□□ -1.46
CUX1-208ENST00000485792 ELOVL2Q9NXB9 296 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 MBD1Q9UIS9 605 aaPredicted RBP5.91□□□□□ -1.46
CUX1-208ENST00000485792 CAPN11Q9UMQ6 739 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 MFHAS1Q9Y4C4 1052 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 ZFHX4Q86UP3 3567 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 PLXNB3Q9ULL4 1909 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 BPTFQ12830 3046 aa5.91□□□□□ -1.46
CUX1-208ENST00000485792 COL5A1P20908 1838 aaPredicted RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 A0A0U1RQJ8 604 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 TBC1D3BA6NDS4 549 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 PES1O00541 588 aaKnown RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 TSPAN3O60637 253 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 LRP3O75074 770 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 CD160O95971 181 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 LMNAP02545 664 aaKnown RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 CCDC172P0C7W6 258 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 SKILP12757 684 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 GABRG2P18507 467 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 TACR2P21452 398 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 GLDCP23378 1020 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 RFC1P35251 1148 aaPredicted RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 P2RY2P41231 377 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 WASP42768 502 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 SLC11A2P49281 568 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 COPAP53621 1224 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 HDAC4P56524 1084 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 UBASH3AP57075 661 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 RPL7AP62424 266 aaKnown RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 ZBED6P86452 979 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 LMAN2Q12907 356 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 TBX2Q13207 712 aaPredicted RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 SEMA3BQ13214 749 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 CAMK2GQ13555 558 aaPredicted RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 SLC12A1Q13621 1099 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 LPAL2Q16609 132 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 CA9Q16790 459 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 ANO4Q32M45 955 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 FILIP1LQ4L180 1135 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 SPDYCQ5MJ68 293 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 EOGTQ5NDL2 527 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 TBCELQ5QJ74 424 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 LCE2AQ5TA79 106 aaPredicted RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 PEAR1Q5VY43 1037 aaPredicted RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 RAP1GAP2Q684P5 730 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 TXNRD3NBQ6F5E7 133 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 OR6B2Q6IFH4 312 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 ACAD10Q6JQN1 1059 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 PPP1R2P3Q6NXS1 205 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 FBXL22Q6P050 247 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 ZC3H14Q6PJT7 736 aaKnown RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 STRADAQ7RTN6 431 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 PRICKLE2Q7Z3G6 844 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 TRMT11Q7Z4G4 463 aaKnown RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 ANKS1BQ7Z6G8 1248 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 ALYREFQ86V81 257 aaKnown RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 TP53INP2Q8IXH6 220 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 APCDD1Q8J025 514 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 CFAP52Q8N1V2 620 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 PYROXD2Q8N2H3 581 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 CCDC185Q8N715 623 aa5.9□□□□□ -1.46
CUX1-208ENST00000485792 ZNF513Q8N8E2 541 aaPredicted RBP5.9□□□□□ -1.46
CUX1-208ENST00000485792 TXNDC5Q8NBS9 432 aaKnown RBP5.9□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms