RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 ARL6IP4Q66PJ3 421 aaKnown RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 CENPPQ6IPU0 288 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 SLC2A7Q6PXP3 512 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 MTHFD1LQ6UB35 978 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 TEPPQ6URK8 271 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 LRIG3Q6UXM1 1119 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 DPP8Q6V1X1 898 aaPredicted RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 SZRD1Q7Z422 152 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 TADA2BQ86TJ2 420 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 CAND1Q86VP6 1230 aaKnown RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 ITPRIPQ8IWB1 547 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 UNC5BQ8IZJ1 945 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 SH2D3CQ8N5H7 860 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 RNF10Q8N5U6 811 aaKnown RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 OR5AN1Q8NGI8 311 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 SLC5A11Q8WWX8 675 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 SGK3Q96BR1 496 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 LRRC39Q96DD0 335 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 C11orf24Q96F05 449 aaPredicted RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 ZNF764Q96H86 408 aaPredicted RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 SNX22Q96L94 193 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 CMTM3Q96MX0 182 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 VRK1Q99986 396 aaPredicted RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 BCL7BQ9BQE9 202 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 SOX7Q9BT81 388 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 THUMPD2Q9BTF0 503 aaKnown RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 TRIM2Q9C040 744 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 LSG1Q9H089 658 aaKnown RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 DENND2DQ9H6A0 471 aaPredicted RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 TTC12Q9H892 705 aaPredicted RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 SEPSECSQ9HD40 501 aaKnown RBP4.69□□□□□ -1.66
RTN4-213ENST00000485749 SLC39A2Q9NP94 309 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 FAM114A2Q9NRY5 505 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 SACM1LQ9NTJ5 587 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 STK32BQ9NY57 414 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 NINJ2Q9NZG7 142 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 MBD2Q9UBB5 411 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 BAIAP2L1Q9UHR4 511 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 CPA4Q9UI42 421 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 ZDHHC8Q9ULC8 765 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 MAN2B2Q9Y2E5 1009 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 CBY1Q9Y3M2 126 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 CFAP43Q8NDM7 1665 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 CNTLNQ9NXG0 1405 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 NCOA2Q15596 1464 aa4.69□□□□□ -1.66
RTN4-213ENST00000485749 CUX1P39880 1505 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 HMGXB3Q12766 1538 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 CCDC78A2IDD5 438 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 GOLGA6L4A6NEF3 574 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 E9PBE3 544 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 VILLO15195 856 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 CIDEAO60543 219 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 ZC3H11AO75152 810 aaKnown RBP eCLIP4.68□□□□□ -1.664e-32■■■□□ 15
RTN4-213ENST00000485749 GJB3O75712 270 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 CRTAPO75718 401 aaPredicted RBP4.68□□□□□ -1.66
RTN4-213ENST00000485749 BCAS2O75934 225 aaPredicted RBP4.68□□□□□ -1.66
RTN4-213ENST00000485749 FAM155BO75949 473 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 LY86O95711 162 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 GASTP01350 101 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 HMOX1P09601 288 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 HNRNPA1P09651 372 aaKnown RBP eCLIP4.68□□□□□ -1.66
RTN4-213ENST00000485749 TROVE2P10155 538 aaKnown RBP eCLIP4.68□□□□□ -1.66
RTN4-213ENST00000485749 TYMPP19971 482 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 CCNA2P20248 432 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 IL15P40933 162 aaPredicted RBP4.68□□□□□ -1.66
RTN4-213ENST00000485749 MAGEA4P43358 317 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 HAAOP46952 286 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 FLT3LGP49771 235 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 CPT1AP50416 773 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 ZNF81P51508 661 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 WNT3AP56704 352 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 CARD18P57730 90 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 STARD6P59095 220 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 MRPS5P82675 430 aaKnown RBP4.68□□□□□ -1.66
RTN4-213ENST00000485749 TFAP4Q01664 338 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 DNAJC3Q13217 504 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 GIT2Q14161 759 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 RCN2Q14257 317 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 PUM1Q14671 1186 aaKnown RBP eCLIP4.68□□□□□ -1.66
RTN4-213ENST00000485749 SNCBQ16143 134 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 LRRC23Q53EV4 343 aaPredicted RBP4.68□□□□□ -1.66
RTN4-213ENST00000485749 CEP78Q5JTW2 689 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 FAXCQ5TGI0 409 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 VASNQ6EMK4 673 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 SLC25A24Q6NUK1 477 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 BORAQ6PGQ7 559 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 RPTNQ6XPR3 784 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 Q6ZVL8 140 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 MICALCLQ6ZW33 695 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 RHOUQ7L0Q8 258 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 TAS1R1Q7RTX1 841 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 RABEPKQ7Z6M1 372 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 GGNQ86UU5 652 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 PROSER1Q86XN7 944 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 CEP57Q86XR8 500 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 ARMC8Q8IUR7 673 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 MCEMP1Q8IX19 187 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 BBS5Q8N3I7 341 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 CCDC63Q8NA47 563 aa4.68□□□□□ -1.66
RTN4-213ENST00000485749 POMGNT2Q8NAT1 580 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms