RNA–Protein interactions for RNA: ENST00000485550.5

HMGN1-215, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 745 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-215ENST00000485550 PCDHGA12O60330 932 aa10.92□□□□□ -0.66
HMGN1-215ENST00000485550 LUC7L3O95232 432 aaKnown RBP10.92□□□□□ -0.66
HMGN1-215ENST00000485550 MTIF2P46199 727 aaKnown RBP10.92□□□□□ -0.66
HMGN1-215ENST00000485550 GRIA4P48058 902 aa10.92□□□□□ -0.66
HMGN1-215ENST00000485550 PDCLQ13371 301 aa10.92□□□□□ -0.66
HMGN1-215ENST00000485550 TPD52L1Q16890 204 aaPredicted RBP10.92□□□□□ -0.66
HMGN1-215ENST00000485550 EXOC3L4Q17RC7 722 aa10.92□□□□□ -0.66
HMGN1-215ENST00000485550 KIF26BQ2KJY2 2108 aa10.92□□□□□ -0.66
HMGN1-215ENST00000485550 HES3Q5TGS1 186 aa10.92□□□□□ -0.66
HMGN1-215ENST00000485550 ZNF776Q68DI1 518 aaPredicted RBP10.92□□□□□ -0.66
HMGN1-215ENST00000485550 OR6B2Q6IFH4 312 aa10.92□□□□□ -0.66
HMGN1-215ENST00000485550 GBP6Q6ZN66 633 aa10.92□□□□□ -0.66
HMGN1-215ENST00000485550 ADAT2Q7Z6V5 191 aaKnown RBP10.92□□□□□ -0.66
HMGN1-215ENST00000485550 MMAAQ8IVH4 418 aaKnown RBP10.92□□□□□ -0.66
HMGN1-215ENST00000485550 DEFB106AQ8N104 65 aa10.92□□□□□ -0.66
HMGN1-215ENST00000485550 ZNF557Q8N988 423 aaPredicted RBP10.92□□□□□ -0.66
HMGN1-215ENST00000485550 BAP1Q92560 729 aa10.92□□□□□ -0.66
HMGN1-215ENST00000485550 RNF34Q969K3 372 aa10.92□□□□□ -0.66
HMGN1-215ENST00000485550 BIRC7Q96CA5 298 aa10.92□□□□□ -0.66
HMGN1-215ENST00000485550 IRX2Q9BZI1 471 aaPredicted RBP10.92□□□□□ -0.66
HMGN1-215ENST00000485550 THAP9Q9H5L6 903 aa10.92□□□□□ -0.66
HMGN1-215ENST00000485550 FBXL12Q9NXK8 326 aa10.92□□□□□ -0.66
HMGN1-215ENST00000485550 SERGEFQ9UGK8 458 aa10.92□□□□□ -0.66
HMGN1-215ENST00000485550 AJAP1Q9UKB5 411 aaPredicted RBP10.92□□□□□ -0.66
HMGN1-215ENST00000485550 ERVW-1Q9UQF0 538 aa10.92□□□□□ -0.66
HMGN1-215ENST00000485550 NCKAP1Q9Y2A7 1128 aa10.92□□□□□ -0.66
HMGN1-215ENST00000485550 PIEZO2Q9H5I5 2752 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 A0A1W2PP55 124 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 F5H5T6 163 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 MID1O15344 667 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 ARHGAP6O43182 974 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 RNASEH1O60930 286 aaKnown RBP10.91□□□□□ -0.66
HMGN1-215ENST00000485550 RFPL3O75679 317 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 MOCS3O95396 460 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 LDOC1O95751 146 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-215ENST00000485550 ASLP04424 464 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 PNMA6AP0CW24 399 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-215ENST00000485550 PDGFRAP16234 1089 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 PON1P27169 355 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 GGCXP38435 758 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 CTSKP43235 329 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 STK19P49842 368 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-215ENST00000485550 UBE2HP62256 183 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 CDK17Q00537 523 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 TLE3Q04726 772 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 ZBTB16Q05516 673 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 NNTQ13423 1086 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 HNRNPA1L2Q32P51 320 aaKnown RBP10.91□□□□□ -0.66
HMGN1-215ENST00000485550 INAVAQ3KP66 663 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 TTC31Q49AM3 519 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-215ENST00000485550 HSP90AA4PQ58FG1 418 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 C9orf64Q5T6V5 341 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 RNF219Q5W0B1 726 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-215ENST00000485550 ENOSF1Q7L5Y1 443 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 IRF2BP1Q8IU81 584 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 STK40Q8N2I9 435 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 ATP6V0D2Q8N8Y2 350 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 C1orf131Q8NDD1 294 aaKnown RBP10.91□□□□□ -0.66
HMGN1-215ENST00000485550 SNIP1Q8TAD8 396 aaKnown RBP10.91□□□□□ -0.66
HMGN1-215ENST00000485550 CNDP2Q96KP4 475 aaKnown RBP10.91□□□□□ -0.66
HMGN1-215ENST00000485550 PPP1R13BQ96KQ4 1090 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 BTN2A3PQ96KV6 586 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 CPXM1Q96SM3 734 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 SEMA4CQ9C0C4 833 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 RSPH9Q9H1X1 276 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-215ENST00000485550 NEUROG2Q9H2A3 272 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 PABPC3Q9H361 631 aaKnown RBP10.91□□□□□ -0.66
HMGN1-215ENST00000485550 CLMPQ9H6B4 373 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 FAM204AQ9H8W3 233 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 FBRSQ9HAH7 460 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 SGK2Q9HBY8 427 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 PLCB1Q9NQ66 1216 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.91□□□□□ -0.66
HMGN1-215ENST00000485550 DDIT4Q9NX09 232 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 APEX2Q9UBZ4 518 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 SLC12A6Q9UHW9 1150 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 DNAJC12Q9UKB3 198 aa10.91□□□□□ -0.66
HMGN1-215ENST00000485550 KCNU1A8MYU2 1149 aa10.9□□□□□ -0.66
HMGN1-215ENST00000485550 ERVH48-1M5A8F1 160 aa10.9□□□□□ -0.66
HMGN1-215ENST00000485550 FOXN3O00409 490 aaPredicted RBP10.9□□□□□ -0.66
HMGN1-215ENST00000485550 BRINP1O60477 761 aa10.9□□□□□ -0.66
HMGN1-215ENST00000485550 RNASEH2AO75792 299 aaKnown RBP10.9□□□□□ -0.66
HMGN1-215ENST00000485550 IGLV3-25P01717 112 aa10.9□□□□□ -0.66
HMGN1-215ENST00000485550 IGHV4-34P06331 123 aa10.9□□□□□ -0.66
HMGN1-215ENST00000485550 VAV1P15498 845 aa10.9□□□□□ -0.66
HMGN1-215ENST00000485550 ABCB4P21439 1286 aa10.9□□□□□ -0.66
HMGN1-215ENST00000485550 CD27P26842 260 aa10.9□□□□□ -0.66
HMGN1-215ENST00000485550 MZF1P28698 734 aaPredicted RBP10.9□□□□□ -0.66
HMGN1-215ENST00000485550 SLC8A1P32418 973 aa10.9□□□□□ -0.66
HMGN1-215ENST00000485550 PSMD8P48556 350 aa10.9□□□□□ -0.66
HMGN1-215ENST00000485550 GALCP54803 685 aa10.9□□□□□ -0.66
HMGN1-215ENST00000485550 ECT2LQ008S8 904 aa10.9□□□□□ -0.66
HMGN1-215ENST00000485550 NME3Q13232 169 aa10.9□□□□□ -0.66
HMGN1-215ENST00000485550 RTP5Q14D33 572 aa10.9□□□□□ -0.66
HMGN1-215ENST00000485550 CST6Q15828 149 aa10.9□□□□□ -0.66
HMGN1-215ENST00000485550 MEA1Q16626 185 aa10.9□□□□□ -0.66
HMGN1-215ENST00000485550 KIAA0895LQ68EN5 471 aa10.9□□□□□ -0.66
HMGN1-215ENST00000485550 NCEH1Q6PIU2 408 aa10.9□□□□□ -0.66
HMGN1-215ENST00000485550 FAM183BPQ6ZVS7 135 aa10.9□□□□□ -0.66
HMGN1-215ENST00000485550 BEND5Q7L4P6 421 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms