RNA–Protein interactions for RNA: ENST00000485024.1

VPS8-223, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 477 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-223ENST00000485024 GALNTL6Q49A17 601 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 SPATA1Q5VX52 437 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 FAM90A2PQ658T7 463 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 TBC1D3GQ6DHY5 549 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 TBC1D3CQ6IPX1 549 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 DENND1BQ6P3S1 775 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 IRF2BP2Q7Z5L9 587 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 WDR53Q7Z5U6 358 aaPredicted RBP4.3□□□□□ -1.72
VPS8-223ENST00000485024 HEATR4Q86WZ0 1026 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 ARMC8Q8IUR7 673 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 TBC1D3Q8IZP1 549 aaPredicted RBP4.3□□□□□ -1.72
VPS8-223ENST00000485024 PTGR2Q8N8N7 351 aaPredicted RBP4.3□□□□□ -1.72
VPS8-223ENST00000485024 C11orf44Q8N8P7 122 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 CCDC89Q8N998 374 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 RP9Q8TA86 221 aaKnown RBP4.3□□□□□ -1.72
VPS8-223ENST00000485024 TBC1D22AQ8WUA7 517 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 SLC22A17Q8WUG5 538 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 NSMCE1Q8WV22 266 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 ST8SIA4Q92187 359 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 WBP1Q96G27 269 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 CTAGE1Q96RT6 745 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 TMEM79Q9BSE2 394 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 PAIP1Q9H074 479 aaKnown RBP4.3□□□□□ -1.72
VPS8-223ENST00000485024 ABHD16BQ9H3Z7 469 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 KLC4Q9NSK0 619 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 CNOT7Q9UIV1 285 aaKnown RBP4.3□□□□□ -1.72
VPS8-223ENST00000485024 KCND3Q9UK17 655 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 DNAJC16Q9Y2G8 782 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 GDAQ9Y2T3 454 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 PCDHB7Q9Y5E2 793 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 KDM5CP41229 1560 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 ZFYVE16Q7Z3T8 1539 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 KDM5DQ9BY66 1539 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 XIRP1Q702N8 1843 aaKnown RBP4.3□□□□□ -1.72
VPS8-223ENST00000485024 ATP10AO60312 1499 aa4.3□□□□□ -1.72
VPS8-223ENST00000485024 CNTLNQ9NXG0 1405 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 UNC13BO14795 1591 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 SYNMO15061 1565 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 LOC105369274A0A096LPK9 316 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 LOC102723532A0A0G2JNH3 316 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 VWA3AA6NCI4 1184 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 PRSS44E7EML9 344 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 K7ENM7 598 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 AGPSO00116 658 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 TSPAN4O14817 238 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 ZBED4O75132 1171 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 PMPCBO75439 489 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 RNASEH2AO75792 299 aaKnown RBP4.29□□□□□ -1.72
VPS8-223ENST00000485024 NHLRC4P0CG21 123 aaPredicted RBP4.29□□□□□ -1.72
VPS8-223ENST00000485024 GRK5P34947 590 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 THBS4P35443 961 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 PNPLA4P41247 253 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 PDE1AP54750 535 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 CASP6P55212 293 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 RNASELQ05823 741 aaKnown RBP4.29□□□□□ -1.72
VPS8-223ENST00000485024 DCTN1Q14203 1278 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 TBCCQ15814 346 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 AAK1Q2M2I8 961 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 PROSER3Q2NL68 480 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 AASDHQ4L235 1098 aaPredicted RBP4.29□□□□□ -1.72
VPS8-223ENST00000485024 LIPMQ5VYY2 423 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 ACAD10Q6JQN1 1059 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 WDR93Q6P2C0 686 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 CFAP161Q6P656 301 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 TMEM88Q6PEY1 159 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 PARS2Q7L3T8 475 aaKnown RBP4.29□□□□□ -1.72
VPS8-223ENST00000485024 TBC1D1Q86TI0 1168 aaPredicted RBP4.29□□□□□ -1.72
VPS8-223ENST00000485024 OR4N4Q8N0Y3 316 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 PNPLA1Q8N8W4 532 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 ADPRHL1Q8NDY3 354 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 TOR1AIP2Q8NFQ8 470 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 ZCCHC10Q8TBK6 192 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 UCMAQ8WVF2 138 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 GLMPQ8WWB7 406 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 XAGE5Q8WWM1 108 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 PRSS22Q9GZN4 317 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 PPP1R14DQ9NXH3 145 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 MGAT4CQ9UBM8 478 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 CCNL1Q9UK58 526 aaPredicted RBP4.29□□□□□ -1.72
VPS8-223ENST00000485024 FGD5Q6ZNL6 1462 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 ARHGAP23Q9P227 1491 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 PHLPP1O60346 1717 aa4.29□□□□□ -1.72
VPS8-223ENST00000485024 FRMPD1Q5SYB0 1578 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 FAM90A20PA6NIJ5 464 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 TTC34A8MYJ7 566 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 KCNU1A8MYU2 1149 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 TISP43B9A030 160 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 STX16-NPEPL1H3BU86 382 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 GTPBP1O00178 669 aaKnown RBP4.28□□□□□ -1.72
VPS8-223ENST00000485024 STX16O14662 325 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 TULP3O75386 442 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 RTN3O95197 1032 aaPredicted RBP4.28□□□□□ -1.72
VPS8-223ENST00000485024 ALDOAP04075 364 aaKnown RBP4.28□□□□□ -1.72
VPS8-223ENST00000485024 SLC3A2P08195 630 aaKnown RBP4.28□□□□□ -1.72
VPS8-223ENST00000485024 CYP3A4P08684 503 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 HNRNPA1P09651 372 aaKnown RBP eCLIP4.28□□□□□ -1.72
VPS8-223ENST00000485024 MYCLP12524 364 aaPredicted RBP4.28□□□□□ -1.72
VPS8-223ENST00000485024 CPA1P15085 419 aa4.28□□□□□ -1.72
VPS8-223ENST00000485024 IGHMBP2P38935 993 aaKnown RBP4.28□□□□□ -1.72
VPS8-223ENST00000485024 PAFAH1B1P43034 410 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms