RNA–Protein interactions for RNA: ENST00000484134.5

RPUSD3-216, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 2,491 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-216ENST00000484134 ZBED3Q96IU2 234 aaPredicted RBP20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 AGAP3Q96P47 875 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 NPAS2Q99743 824 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 AP4E1Q9UPM8 1137 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 ZNF487B1APH4 448 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 RNF103O00237 685 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 ATP6V1G1O75348 118 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 TFEBP19484 476 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 PPARGP37231 505 aaPredicted RBP20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 GARSP41250 739 aaKnown RBP20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 STT3AP46977 705 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 ALDH3B2P48448 385 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 SMYD5Q6GMV2 418 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 TRIM50Q86XT4 487 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 ERI1Q8IV48 349 aaKnown RBP20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 AKT1S1Q96B36 256 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 FZD8Q9H461 694 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 ACAD9Q9H845 621 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 NMRAL1Q9HBL8 299 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 FAM49BQ9NUQ9 324 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 OXSMQ9NWU1 459 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 ZDHHC2Q9UIJ5 367 aa20.15■□□□□ 0.82
RPUSD3-216ENST00000484134 XPO1O14980 1071 aaKnown RBP20.14■□□□□ 0.82
RPUSD3-216ENST00000484134 C2P06681 752 aa20.14■□□□□ 0.82
RPUSD3-216ENST00000484134 POLBP06746 335 aa20.14■□□□□ 0.82
RPUSD3-216ENST00000484134 ARL13AQ5H913 290 aaPredicted RBP20.14■□□□□ 0.82
RPUSD3-216ENST00000484134 SEL1L3Q68CR1 1132 aa20.14■□□□□ 0.82
RPUSD3-216ENST00000484134 MTMR14Q8NCE2 650 aa20.14■□□□□ 0.82
RPUSD3-216ENST00000484134 DLG3Q92796 817 aa20.14■□□□□ 0.82
RPUSD3-216ENST00000484134 ZNF277Q9NRM2 450 aaPredicted RBP20.14■□□□□ 0.82
RPUSD3-216ENST00000484134 ADAMTS5Q9UNA0 930 aa20.14■□□□□ 0.82
RPUSD3-216ENST00000484134 TCAF2A6NFQ2 919 aa20.14■□□□□ 0.81
RPUSD3-216ENST00000484134 CSPG5O95196 566 aa20.14■□□□□ 0.81
RPUSD3-216ENST00000484134 IL18RAPO95256 599 aa20.14■□□□□ 0.81
RPUSD3-216ENST00000484134 ZFXP17010 805 aaPredicted RBP20.14■□□□□ 0.81
RPUSD3-216ENST00000484134 CDK9P50750 372 aaKnown RBP20.14■□□□□ 0.81
RPUSD3-216ENST00000484134 RPL14P50914 215 aaKnown RBP20.14■□□□□ 0.81
RPUSD3-216ENST00000484134 LIMK2P53671 638 aa20.14■□□□□ 0.81
RPUSD3-216ENST00000484134 INCA1Q0VD86 236 aa20.14■□□□□ 0.81
RPUSD3-216ENST00000484134 ADRM1Q16186 407 aa20.14■□□□□ 0.81
RPUSD3-216ENST00000484134 TMEM151AQ8N4L1 468 aa20.14■□□□□ 0.81
RPUSD3-216ENST00000484134 TRIML2Q8N7C3 387 aa20.14■□□□□ 0.81
RPUSD3-216ENST00000484134 SLC7A14Q8TBB6 771 aa20.14■□□□□ 0.81
RPUSD3-216ENST00000484134 TRAPPC12Q8WVT3 735 aa20.14■□□□□ 0.81
RPUSD3-216ENST00000484134 EME1Q96AY2 570 aa20.14■□□□□ 0.81
RPUSD3-216ENST00000484134 TMA16Q96EY4 203 aaKnown RBP20.14■□□□□ 0.81
RPUSD3-216ENST00000484134 P2RY11Q96G91 374 aa20.14■□□□□ 0.81
RPUSD3-216ENST00000484134 THEGQ9P2T0 379 aa20.14■□□□□ 0.81
RPUSD3-216ENST00000484134 RAP2CQ9Y3L5 183 aa20.14■□□□□ 0.81
RPUSD3-216ENST00000484134 USP3Q9Y6I4 520 aa20.14■□□□□ 0.81
RPUSD3-216ENST00000484134 PLOD2O00469 737 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 USP12O75317 370 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 PIGNO95427 931 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 HNRNPCP07910 306 aaKnown RBP eCLIP20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 SBK3P0C264 359 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 STAG3L1P0CL83 205 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 NDST2P52849 883 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 BACE1P56817 501 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 TXNL4AP83876 142 aaKnown RBP20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 NSUN2Q08J23 767 aaKnown RBP eCLIP20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 ART3Q13508 389 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 MXD4Q14582 209 aaPredicted RBP20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 PKDCCQ504Y2 493 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 POTEHQ6S545 545 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 FNDC8Q8TC99 324 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 URGCPQ8TCY9 931 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 SLC29A1Q99808 456 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 LPIN3Q9BQK8 851 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 OLAHQ9NV23 265 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 SEPT10Q9P0V9 454 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 CNOT11Q9UKZ1 510 aaKnown RBP20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 TDRKHQ9Y2W6 561 aaKnown RBP20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 GTF3C5Q9Y5Q8 519 aaPredicted RBP20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 KPNA7A9QM74 516 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 TK2O00142 265 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 MFSD11O43934 449 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 PEX10O60683 326 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 VAPBO95292 243 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 FAM163BP0C2L3 166 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 SPRP35270 261 aaPredicted RBP20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 GRIA4P48058 902 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 NXNQ6DKJ4 435 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 TMEM110Q86TL2 294 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 OR52K1Q8NGK4 314 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 ZNF597Q96LX8 424 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 NAT9Q9BTE0 207 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 C11orf84Q9BUA3 381 aaPredicted RBP20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 PCDHAC1Q9H158 963 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 SUDS3Q9H7L9 328 aaPredicted RBP20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 VRTNQ9H8Y1 702 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 ZBTB26Q9HCK0 441 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 EIF2B3Q9NR50 452 aaKnown RBP20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 BCAP29Q9UHQ4 241 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 ADAM28Q9UKQ2 775 aa20.13■□□□□ 0.81
RPUSD3-216ENST00000484134 H6PDO95479 791 aa20.12■□□□□ 0.81
RPUSD3-216ENST00000484134 FGFR3P22607 806 aa20.12■□□□□ 0.81
RPUSD3-216ENST00000484134 RPL10P27635 214 aaKnown RBP20.12■□□□□ 0.81
RPUSD3-216ENST00000484134 HMGCS2P54868 508 aa20.12■□□□□ 0.81
RPUSD3-216ENST00000484134 IKBKEQ14164 716 aa20.12■□□□□ 0.81
RPUSD3-216ENST00000484134 LPCAT2Q7L5N7 544 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms