RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 CCNB1P14635 433 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 ATP2A2P16615 1042 aaKnown RBP9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 HMGA1P17096 107 aaKnown RBP9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 WDR5P61964 334 aaKnown RBP9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 CDK16Q00536 496 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 SMARCB1Q12824 385 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 SLC1A5Q15758 541 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 AFMIDQ63HM1 303 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 FBXL22Q6P050 247 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 CASC4Q6P4E1 433 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 OTOP2Q7RTS6 562 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 CTAGE3PQ8IX95 158 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 LRRC34Q8IZ02 419 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 RTL3Q8N8U3 475 aaKnown RBP9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 ZNF461Q8TAF7 563 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 LRRC39Q96DD0 335 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 CHMP6Q96FZ7 201 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 LRCH3Q96II8 777 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 CCDC134Q9H6E4 229 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 EIF2B3Q9NR50 452 aaKnown RBP9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 MOCS1Q9NZB8 636 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 ZNF212Q9UDV6 495 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 BACE2Q9Y5Z0 518 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 ABHD14A-ACY1A0A1B0GW23 586 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 FAM47DPA6NHR8 397 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 ARHGAP42A6NI28 874 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 SDR42E2A6NKP2 422 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 SRRM3A6NNA2 597 aaPredicted RBP9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 KIAA0355O15063 1070 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 ABLIM3O94929 683 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 GJB5O95377 273 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 AP2A1O95782 977 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 PEX11BO96011 259 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 SOD2P04179 222 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 F7P08709 466 aaPredicted RBP9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 MLNP12872 115 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 DNAJB2P25686 324 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 PAPOLAP51003 745 aaKnown RBP9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 NRG1Q02297 640 aaPredicted RBP9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 RAP1GAP2Q684P5 730 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 NADSYN1Q6IA69 706 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 LRRC6Q86X45 466 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 SLC39A11Q8N1S5 342 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 ARHGAP18Q8N392 663 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 GSDMBQ8TAX9 411 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 STAMBPL1Q96FJ0 436 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 FCRL3Q96P31 734 aaPredicted RBP9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 TSGA13Q96PP4 275 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 TTLL2Q9BWV7 592 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 BRD8Q9H0E9 1235 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 GBA3Q9H227 469 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 CATSPERBQ9H7T0 1116 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 PRKAG2Q9UGJ0 569 aa9.04□□□□□ -0.96
CDC42SE1-204ENST00000483763 CARNS1A5YM72 827 aa9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 ZBBXA8MT70 800 aa9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 FGF10O15520 208 aaPredicted RBP9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 SPAG6O75602 509 aa9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 ASMTLO95671 621 aa9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 TPH1P17752 444 aa9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 CCNCP24863 283 aa9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 FOXN2P32314 431 aa9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 STX2P32856 288 aa9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 RPL10AP62906 217 aaKnown RBP9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 NR1H3Q13133 447 aa9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 BTG3Q14201 252 aaPredicted RBP9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 TRIP4Q15650 581 aaPredicted RBP9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 CERCAMQ5T4B2 595 aa9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 C16orf59Q7L2K0 433 aa9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 TAX1BP1Q86VP1 789 aa9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 ATPAF2Q8N5M1 289 aa9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 C2orf15Q8WU43 125 aaKnown RBP9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 BTN2A3PQ96KV6 586 aa9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 SMC6Q96SB8 1091 aa9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 FERMT1Q9BQL6 677 aa9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 UBE2OQ9C0C9 1292 aaKnown RBP9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 RNF38Q9H0F5 515 aa9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 PPCSQ9HAB8 311 aa9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 CYP4F11Q9HBI6 524 aa9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 PCDHA11Q9Y5I1 949 aa9.03□□□□□ -0.96
CDC42SE1-204ENST00000483763 IGLV3-10A0A075B6K4 115 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 ZNF840PA6NDX5 716 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 FAM159BA6NKW6 160 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 TCP11X1B4DZS4 312 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 J3KR12 359 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 TRDMT1O14717 391 aaKnown RBP9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 PRPF4O43172 522 aaKnown RBP eCLIP9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 CACNG3O60359 315 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 ALDH1A2O94788 518 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 SUN1O94901 812 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 INHBAP08476 426 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 SLC2A3P11169 496 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 SARNPP82979 210 aaKnown RBP9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 DSG1Q02413 1049 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 BMPR2Q13873 1038 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 IHHQ14623 411 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 SHHQ15465 462 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 HABP4Q5JVS0 413 aaKnown RBP9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 RFWD3Q6PCD5 774 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 SLC26A11Q86WA9 606 aa9.02□□□□□ -0.96
CDC42SE1-204ENST00000483763 DYDC1Q8WWB3 177 aa9.02□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms