RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 LATS1O95835 1130 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 APOEP02649 317 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 CD48P09326 243 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 RARAP10276 462 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 TNNT1P13805 278 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 NDUFV2P19404 249 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 IL4RP24394 825 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 HOXD9P28356 352 aaPredicted RBP9.89□□□□□ -0.83
HMG20B-210ENST00000483417 L1CAMP32004 1257 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 IL12RB1P42701 662 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 PTGER3P43115 390 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 SLC11A2P49281 568 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 SLC25A11Q02978 314 aaKnown RBP9.89□□□□□ -0.83
HMG20B-210ENST00000483417 CCDC173Q0VFZ6 552 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 BYSLQ13895 437 aaKnown RBP9.89□□□□□ -0.83
HMG20B-210ENST00000483417 SMTNL2Q2TAL5 461 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 MPPE1Q53F39 396 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 BRMS1LQ5PSV4 323 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 ERMARDQ5T6L9 678 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 PEAR1Q5VY43 1037 aaPredicted RBP9.89□□□□□ -0.83
HMG20B-210ENST00000483417 SDE2Q6IQ49 451 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 SND1Q7KZF4 910 aaKnown RBP eCLIP9.89□□□□□ -0.83
HMG20B-210ENST00000483417 METTL3Q86U44 580 aaKnown RBP9.89□□□□□ -0.83
HMG20B-210ENST00000483417 TMEFF1Q8IYR6 380 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 C17orf53Q8N3J3 647 aaPredicted RBP9.89□□□□□ -0.83
HMG20B-210ENST00000483417 NIPA2Q8N8Q9 360 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 C12orf50Q8NA57 414 aaPredicted RBP9.89□□□□□ -0.83
HMG20B-210ENST00000483417 CCDC112Q8NEF3 446 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 DDI1Q8WTU0 396 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 LMLNQ96KR4 655 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 MRGPRX1Q96LB2 322 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 C1orf74Q96LT6 269 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 HAPLN3Q96S86 360 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 KCTD15Q96SI1 283 aaPredicted RBP9.89□□□□□ -0.83
HMG20B-210ENST00000483417 SNRNP25Q9BV90 132 aaKnown RBP9.89□□□□□ -0.83
HMG20B-210ENST00000483417 OSBPL2Q9H1P3 480 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 LZTFL1Q9NQ48 299 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 NDFIP2Q9NV92 336 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 ELOVL2Q9NXB9 296 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 TRMT1Q9NXH9 659 aaKnown RBP9.89□□□□□ -0.83
HMG20B-210ENST00000483417 CACNA2D2Q9NY47 1150 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 THAP10Q9P2Z0 257 aaPredicted RBP9.89□□□□□ -0.83
HMG20B-210ENST00000483417 OR12D3Q9UGF7 316 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 SLC12A6Q9UHW9 1150 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 GUCA1BQ9UMX6 200 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 RAD54BQ9Y620 910 aa9.89□□□□□ -0.83
HMG20B-210ENST00000483417 MYO18AQ92614 2054 aaKnown RBP9.89□□□□□ -0.83
HMG20B-210ENST00000483417 PLXND1Q9Y4D7 1925 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 CACNA1AO00555 2505 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 A0A0A6YYK5 440 aaPredicted RBP9.88□□□□□ -0.83
HMG20B-210ENST00000483417 IGHV1OR15-9A0A0B4J2B8 117 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 LNP1A1A4G5 178 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 GRID2IPA4D2P6 1211 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 BTNL10A8MVZ5 291 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 CDX4O14627 284 aaPredicted RBP9.88□□□□□ -0.83
HMG20B-210ENST00000483417 NPC1O15118 1278 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 TIMM44O43615 452 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 SLC2A3P11169 496 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 HLA-FP30511 346 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 PCK1P35558 622 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 SSR1P43307 286 aaKnown RBP9.88□□□□□ -0.83
HMG20B-210ENST00000483417 DHPSP49366 369 aaPredicted RBP9.88□□□□□ -0.83
HMG20B-210ENST00000483417 ARSEP51690 589 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 HADHBP55084 474 aaKnown RBP9.88□□□□□ -0.83
HMG20B-210ENST00000483417 NAP1L1P55209 391 aaKnown RBP9.88□□□□□ -0.83
HMG20B-210ENST00000483417 IRX4P78413 519 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 KIF5AQ12840 1032 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 MMRN1Q13201 1228 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 LLGL1Q15334 1064 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 C5orf22Q49AR2 442 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 AASDHQ4L235 1098 aaPredicted RBP9.88□□□□□ -0.83
HMG20B-210ENST00000483417 LPCAT2Q7L5N7 544 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 ADIPOR2Q86V24 386 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 CHSY1Q86X52 802 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 TP53INP2Q8IXH6 220 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 RHOT2Q8IXI1 618 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 PGBD3Q8N328 593 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 DDX51Q8N8A6 666 aaKnown RBP eCLIP9.88□□□□□ -0.83
HMG20B-210ENST00000483417 LRRC57Q8N9N7 239 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 RAPGEF5Q92565 580 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 SLC6A17Q9H1V8 727 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 DHX35Q9H5Z1 703 aaKnown RBP9.88□□□□□ -0.83
HMG20B-210ENST00000483417 ITM2CQ9NQX7 267 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 KLHL11Q9NVR0 708 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 BCCIPQ9P287 314 aaKnown RBP eCLIP9.88□□□□□ -0.83
HMG20B-210ENST00000483417 ZNF212Q9UDV6 495 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 PILRBQ9UKJ0 227 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 NEU3Q9UQ49 428 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 MFHAS1Q9Y4C4 1052 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.88□□□□□ -0.83
HMG20B-210ENST00000483417 CEP250Q9BV73 2442 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 SPAG17Q6Q759 2223 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 NUP205Q92621 2012 aa9.88□□□□□ -0.83
HMG20B-210ENST00000483417 TNRC6BQ9UPQ9 1833 aaKnown RBP9.87□□□□□ -0.83
HMG20B-210ENST00000483417 THADAQ6YHU6 1953 aa9.87□□□□□ -0.83
HMG20B-210ENST00000483417 E9PAM4 449 aa9.87□□□□□ -0.83
HMG20B-210ENST00000483417 KHNYNO15037 678 aaKnown RBP9.87□□□□□ -0.83
HMG20B-210ENST00000483417 MAP3K13O43283 966 aa9.87□□□□□ -0.83
HMG20B-210ENST00000483417 CREB3O43889 395 aa9.87□□□□□ -0.83
HMG20B-210ENST00000483417 PRPSAP2O60256 369 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms