RNA–Protein interactions for RNA: ENST00000483409.1

SSR1-208, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-208ENST00000483409 PRDM16Q9HAZ2 1276 aa13.75□□□□□ -0.21
SSR1-208ENST00000483409 PRSS16Q9NQE7 514 aa13.75□□□□□ -0.21
SSR1-208ENST00000483409 NCDNQ9UBB6 729 aa13.75□□□□□ -0.21
SSR1-208ENST00000483409 SUN2Q9UH99 717 aa13.75□□□□□ -0.21
SSR1-208ENST00000483409 SLC25A13Q9UJS0 675 aa13.75□□□□□ -0.21
SSR1-208ENST00000483409 AP4E1Q9UPM8 1137 aa13.75□□□□□ -0.21
SSR1-208ENST00000483409 FRYLO94915 3013 aa13.75□□□□□ -0.21
SSR1-208ENST00000483409 EP300Q09472 2414 aaPredicted RBP13.74□□□□□ -0.21
SSR1-208ENST00000483409 GON4LQ3T8J9 2241 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 PRPSAP2O60256 369 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 SNAP91O60641 907 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 SIN3BO75182 1162 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 H2AFZP0C0S5 128 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 RHOQP17081 205 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 EPHB2P29323 1055 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 HOXD11P31277 338 aaPredicted RBP13.74□□□□□ -0.21
SSR1-208ENST00000483409 AIF1P55008 147 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 CA9Q16790 459 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 HNRNPA1L2Q32P51 320 aaKnown RBP13.74□□□□□ -0.21
SSR1-208ENST00000483409 PLK5Q496M5 336 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 LAIR1Q6GTX8 287 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 H2AFVQ71UI9 128 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 NLRP14Q86W24 1093 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 DCLK2Q8N568 766 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 OR2T3Q8NH03 318 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 ZNF564Q8TBZ8 553 aaPredicted RBP13.74□□□□□ -0.21
SSR1-208ENST00000483409 CTNNBL1Q8WYA6 563 aaPredicted RBP13.74□□□□□ -0.21
SSR1-208ENST00000483409 PRCCQ92733 491 aaPredicted RBP13.74□□□□□ -0.21
SSR1-208ENST00000483409 SIPA1Q96FS4 1042 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 EPAS1Q99814 870 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 ANP32EQ9BTT0 268 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 DUSP15Q9H1R2 295 aaPredicted RBP13.74□□□□□ -0.21
SSR1-208ENST00000483409 DHX35Q9H5Z1 703 aaKnown RBP13.74□□□□□ -0.21
SSR1-208ENST00000483409 NDFIP2Q9NV92 336 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 TMEM248Q9NWD8 314 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 CTTNBP2NLQ9P2B4 639 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 DNAI1Q9UI46 699 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 VPS51Q9UID3 782 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 MBD1Q9UIS9 605 aaPredicted RBP13.74□□□□□ -0.21
SSR1-208ENST00000483409 GMEB2Q9UKD1 530 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 CYP8B1Q9UNU6 501 aa13.74□□□□□ -0.21
SSR1-208ENST00000483409 PTPRZ1P23471 2315 aaPredicted RBP13.74□□□□□ -0.21
SSR1-208ENST00000483409 ILVBLA1L0T0 632 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 MAP3K13O43283 966 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 ZNF217O75362 1048 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 VAV1P15498 845 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 TCF4P15884 667 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 GLDCP23378 1020 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 NNMTP40261 264 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 MAPKAPK2P49137 400 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 TPI1P60174 286 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 KRT83P78385 493 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 GNA12Q03113 381 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 SEMA3BQ13214 749 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 BYSLQ13895 437 aaKnown RBP13.73□□□□□ -0.21
SSR1-208ENST00000483409 PIGHQ14442 188 aaPredicted RBP13.73□□□□□ -0.21
SSR1-208ENST00000483409 ELF2Q15723 593 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 SMTNL2Q2TAL5 461 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 ERMARDQ5T6L9 678 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 CYP4V2Q6ZWL3 525 aaPredicted RBP13.73□□□□□ -0.21
SSR1-208ENST00000483409 DCAF4L2Q8NA75 395 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 KDM1BQ8NB78 822 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 RUBCNQ92622 972 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 ZC3H10Q96K80 434 aaKnown RBP13.73□□□□□ -0.21
SSR1-208ENST00000483409 KCTD15Q96SI1 283 aaPredicted RBP13.73□□□□□ -0.21
SSR1-208ENST00000483409 SPON2Q9BUD6 331 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 C2orf49Q9BVC5 232 aaPredicted RBP13.73□□□□□ -0.21
SSR1-208ENST00000483409 IP6K2Q9UHH9 426 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 USP18Q9UMW8 372 aa13.73□□□□□ -0.21
SSR1-208ENST00000483409 PI4KAP42356 2102 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 IGHV1OR15-9A0A0B4J2B8 117 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 EDDM13A0A1B0GTR0 161 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 MYO1FO00160 1098 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 CBX4O00257 560 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 RHOBTB1O94844 696 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 MT-CO1P00395 513 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 ACADMP11310 421 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 IL1R2P27930 398 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 PCK1P35558 622 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 ACVRL1P37023 503 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 RPS14P62263 151 aaKnown RBP13.72□□□□□ -0.21
SSR1-208ENST00000483409 ACAP1Q15027 740 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 ACCSLQ4AC99 568 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 PPP6R3Q5H9R7 873 aaPredicted RBP13.72□□□□□ -0.21
SSR1-208ENST00000483409 KCNT1Q5JUK3 1230 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 C9orf64Q5T6V5 341 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 IL31Q6EBC2 164 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 LINGO4Q6UY18 593 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 ZNF783Q6ZMS7 281 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 C11orf74Q86VG3 221 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 STK40Q8N2I9 435 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 SH2D3CQ8N5H7 860 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 NIPA2Q8N8Q9 360 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 RTL3Q8N8U3 475 aaKnown RBP13.72□□□□□ -0.21
SSR1-208ENST00000483409 HSPH1Q92598 858 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 NCAPGQ9BPX3 1015 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 ZWILCHQ9H900 591 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 FBRSQ9HAH7 460 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 ATP13A1Q9HD20 1204 aa13.72□□□□□ -0.21
SSR1-208ENST00000483409 UVRAGQ9P2Y5 699 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms