RNA–Protein interactions for RNA: ENST00000483359.5

CPNE1-224, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,975 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-224ENST00000483359 SNAP91O60641 907 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 PEX5P50542 639 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 FZD5Q13467 585 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 LRRC32Q14392 662 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 POLD3Q15054 466 aaPredicted RBP18.28■□□□□ 0.52
CPNE1-224ENST00000483359 MEI1Q5TIA1 1274 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 NCBP2-AS2Q69YL0 99 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 PKN3Q6P5Z2 889 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 SPOCD1Q6ZMY3 1216 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 KIAA0907Q7Z7F0 614 aaPredicted RBP18.28■□□□□ 0.52
CPNE1-224ENST00000483359 RFX6Q8HWS3 928 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 PQLC3Q8N755 202 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 EXD1Q8NHP7 514 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 RPLP0P6Q8NHW5 317 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 FAF2Q96CS3 445 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 ALG14Q96F25 216 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 RBM41Q96IZ5 413 aaKnown RBP18.28■□□□□ 0.52
CPNE1-224ENST00000483359 RPL10LQ96L21 214 aaKnown RBP18.28■□□□□ 0.52
CPNE1-224ENST00000483359 RNF157Q96PX1 679 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 ACOX2Q99424 681 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 NELL2Q99435 816 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 HCN2Q9UL51 889 aa18.28■□□□□ 0.52
CPNE1-224ENST00000483359 GOLGA6L9A6NEM1 432 aa18.27■□□□□ 0.52
CPNE1-224ENST00000483359 DFFAO00273 331 aa18.27■□□□□ 0.52
CPNE1-224ENST00000483359 CDKN2BP42772 138 aa18.27■□□□□ 0.52
CPNE1-224ENST00000483359 OXCT1P55809 520 aa18.27■□□□□ 0.52
CPNE1-224ENST00000483359 SLC35F6Q8N357 371 aa18.27■□□□□ 0.52
CPNE1-224ENST00000483359 HMCESQ96FZ2 354 aa18.27■□□□□ 0.52
CPNE1-224ENST00000483359 MAK16Q9BXY0 300 aaKnown RBP18.27■□□□□ 0.52
CPNE1-224ENST00000483359 C11orf16Q9NQ32 467 aa18.27■□□□□ 0.52
CPNE1-224ENST00000483359 OR51B4Q9Y5P0 310 aa18.27■□□□□ 0.52
CPNE1-224ENST00000483359 A0A0A0MRY4 1105 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 RASA4BC9J798 803 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 NCAM2O15394 837 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 RASA4O43374 803 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 MFSD11O43934 449 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 PYGMP11217 842 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 AOC1P19801 751 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 WASP42768 502 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 TNFRSF4P43489 277 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 KIR2DL1P43626 348 aaPredicted RBP18.26■□□□□ 0.51
CPNE1-224ENST00000483359 STK19P49842 368 aaPredicted RBP18.26■□□□□ 0.51
CPNE1-224ENST00000483359 SLC12A1Q13621 1099 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 EIF4HQ15056 248 aaKnown RBP18.26■□□□□ 0.51
CPNE1-224ENST00000483359 FBXO43Q4G163 708 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 DGKKQ5KSL6 1271 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 DCAF12L1Q5VU92 463 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 LINGO4Q6UY18 593 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 LEKR1Q6ZMV7 388 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 RCOR2Q8IZ40 523 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 UMODL1-AS1Q8N2C9 162 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 ALLCQ8N6M5 410 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 ARHGEF2Q92974 986 aaKnown RBP18.26■□□□□ 0.51
CPNE1-224ENST00000483359 HEMGNQ9BXL5 484 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 SLC39A8Q9C0K1 460 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 KLC2Q9H0B6 622 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 POLR3BQ9NW08 1133 aaPredicted RBP18.26■□□□□ 0.51
CPNE1-224ENST00000483359 CACNA2D2Q9NY47 1150 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 ADCY2Q08462 1091 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 RPS6KA1Q15418 735 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 TFDP3Q5H9I0 405 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 CHPFQ8IZ52 775 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 ZNF366Q8N895 744 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 UCMAQ8WVF2 138 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 RETREG1Q9H6L5 497 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 LRRC19Q9H756 370 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 VPS51Q9UID3 782 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 ACTL7AQ9Y615 435 aa18.26■□□□□ 0.51
CPNE1-224ENST00000483359 CUL9Q8IWT3 2517 aa18.25■□□□□ 0.51
CPNE1-224ENST00000483359 NYNRINQ9P2P1 1898 aaKnown RBP18.25■□□□□ 0.51
CPNE1-224ENST00000483359 hCG_1818297A0A087WSY0 165 aa18.25■□□□□ 0.51
CPNE1-224ENST00000483359 WASH3PC4AMC7 463 aa18.25■□□□□ 0.51
CPNE1-224ENST00000483359 APOL1O14791 398 aa18.25■□□□□ 0.51
CPNE1-224ENST00000483359 ATP5BP06576 529 aaKnown RBP18.25■□□□□ 0.51
CPNE1-224ENST00000483359 DLDP09622 509 aaKnown RBP18.25■□□□□ 0.51
CPNE1-224ENST00000483359 SERPINB6P35237 376 aa18.25■□□□□ 0.51
CPNE1-224ENST00000483359 GAS6Q14393 721 aa18.25■□□□□ 0.51
CPNE1-224ENST00000483359 DMC1Q14565 340 aa18.25■□□□□ 0.51
CPNE1-224ENST00000483359 PTPRNQ16849 979 aa18.25■□□□□ 0.51
CPNE1-224ENST00000483359 ZNF783Q6ZMS7 281 aa18.25■□□□□ 0.51
CPNE1-224ENST00000483359 ARHGAP12Q8IWW6 846 aa18.25■□□□□ 0.51
CPNE1-224ENST00000483359 PLD5Q8N7P1 536 aa18.25■□□□□ 0.51
CPNE1-224ENST00000483359 DCAF4L2Q8NA75 395 aa18.25■□□□□ 0.51
CPNE1-224ENST00000483359 TXNDC5Q8NBS9 432 aaKnown RBP18.25■□□□□ 0.51
CPNE1-224ENST00000483359 USP33Q8TEY7 942 aa18.25■□□□□ 0.51
CPNE1-224ENST00000483359 C2orf49Q9BVC5 232 aaPredicted RBP18.25■□□□□ 0.51
CPNE1-224ENST00000483359 OSBPL6Q9BZF3 934 aa18.25■□□□□ 0.51
CPNE1-224ENST00000483359 MAGEH1Q9H213 219 aa18.25■□□□□ 0.51
CPNE1-224ENST00000483359 DONSONQ9NYP3 566 aa18.25■□□□□ 0.51
CPNE1-224ENST00000483359 MUC22E2RYF6 1773 aaPredicted RBP18.25■□□□□ 0.51
CPNE1-224ENST00000483359 KLF8O95600 359 aaPredicted RBP18.24■□□□□ 0.51
CPNE1-224ENST00000483359 IL12RB1P42701 662 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 PAPOLAP51003 745 aaKnown RBP18.24■□□□□ 0.51
CPNE1-224ENST00000483359 NDST2P52849 883 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 PLK1P53350 603 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 ECT2LQ008S8 904 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 GBE1Q04446 702 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 ZNF234Q14588 700 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 PARP15Q460N3 678 aa18.24■□□□□ 0.51
CPNE1-224ENST00000483359 FNDC3BQ53EP0 1204 aaKnown RBP18.24■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms