RNA–Protein interactions for RNA: ENST00000483117.1

LAPTM4A-202, Transcript of lysosomal protein transmembrane 4 alpha, humanhuman

TSL 2

Gene LAPTM4A, Length 487 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LAPTM4A-202ENST00000483117 ADPRHP54922 357 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 SHBQ15464 509 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 ZRSR2Q15696 482 aaKnown RBP3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 MAP9Q49MG5 647 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 OTUD1Q5VV17 481 aaPredicted RBP3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 KSR2Q6VAB6 950 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 ZNF329Q86UD4 541 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 CCDC25Q86WR0 208 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 TMEM217Q8N7C4 229 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 CMASQ8NFW8 434 aaPredicted RBP3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 IPO4Q8TEX9 1081 aaKnown RBP3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 CLEC4CQ8WTT0 213 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 BRI3BPQ8WY22 251 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 C18orf8Q96DM3 657 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 MECRQ9BV79 373 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 SARGQ9BW04 601 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 FRMD8Q9BZ67 464 aaPredicted RBP3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 B3GNT4Q9C0J1 378 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 ZNF700Q9H0M5 742 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 CDT1Q9H211 546 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 CCDC134Q9H6E4 229 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 NECTIN3Q9NQS3 549 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 TERF2IPQ9NYB0 399 aa3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 MAGED2Q9UNF1 606 aaPredicted RBP3.42□□□□□ -1.86
LAPTM4A-202ENST00000483117 CYP3A7-CYP3A51PA0A087WV96 503 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 TRBV5-7A0A0A0MS05 114 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 PIP5K1BO14986 540 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 GRID2O43424 1007 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 PPP1R3DO95685 299 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 GLP2RO95838 553 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 MYL1P05976 194 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 CENPBP07199 599 aaPredicted RBP3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 CYP3A4P08684 503 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 PKMP14618 531 aaKnown RBP3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 CHRNB2P17787 502 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 CYP3A7P24462 503 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 KLRC2P26717 231 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 AKT1P31749 480 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 CLCN5P51795 746 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 ART1P52961 327 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 TMPRSS3P57727 454 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 ZBTB16Q05516 673 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 DNTTIP2Q5QJE6 756 aaKnown RBP3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 GFI1BQ5VTD9 330 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 ARL6IP4Q66PJ3 421 aaKnown RBP3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 RINT1Q6NUQ1 792 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 ERAP2Q6P179 960 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 AAGABQ6PD74 315 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 Q6ZSV7 163 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 ZNF367Q7RTV3 350 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 KLBQ86Z14 1044 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 NR4A3Q92570 626 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 RIPOR3Q96MK2 946 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 SORBS1Q9BX66 1292 aaKnown RBP3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 MAF1Q9H063 256 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 RNF146Q9NTX7 359 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 ICAM5Q9UMF0 924 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 DTX4Q9Y2E6 619 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 ZBTB1Q9Y2K1 713 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 CEP83Q9Y592 693 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 DOCK7Q96N67 2140 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 SCN5AQ14524 2016 aa3.41□□□□□ -1.86
LAPTM4A-202ENST00000483117 TBC1D3DA0A087WVF3 549 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 TBC1D3IA0A087WXS9 549 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 TBC1D3EA0A087X179 549 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 TBC1D3KA0A087X1G2 549 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 TCRBV7S3A2A0A539 114 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 TBC1D3BA6NDS4 549 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 TBC1D3FA6NER0 549 aaPredicted RBP3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 TBC1D3LB9A6J9 549 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 LIASO43766 372 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 ZNF432O94892 652 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 GAS8-AS1O95177 125 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 PRSS2P07478 247 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 HSP90AA1P07900 732 aaKnown RBP3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 TBC1D3HP0C7X1 549 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 KRT10P13645 584 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 HSPA7P48741 367 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 ERVFC1-1P60608 527 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 ZP1P60852 638 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 RHAGQ02094 409 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 RNASELQ05823 741 aaKnown RBP3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 BRD3Q15059 726 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 DUSP6Q16828 381 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 MPEG1Q2M385 716 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 TBC1D3GQ6DHY5 549 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 TBC1D3CQ6IPX1 549 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 ARMC9Q7Z3E5 817 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 CAMK1DQ8IU85 385 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 TBC1D3Q8IZP1 549 aaPredicted RBP3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 LRRC57Q8N9N7 239 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 FAM110DQ8TAY7 271 aaPredicted RBP3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 APOLD1Q96LR9 279 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 ARNT2Q9HBZ2 717 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 TM7SF3Q9NS93 570 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 ARL15Q9NXU5 204 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 IGSF9Q9P2J2 1179 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 PCDHGB2Q9Y5G2 931 aa3.4□□□□□ -1.87
LAPTM4A-202ENST00000483117 COPG1Q9Y678 874 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms