RNA–Protein interactions for RNA: ENST00000481673.5

CHKB-209, Transcript of choline kinase beta, humanhuman

TSL 1 (best)

Gene CHKB, Length 1,856 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-209ENST00000481673 LVRNQ6Q4G3 990 aa20.29■□□□□ 0.84
CHKB-209ENST00000481673 TMEM135Q86UB9 458 aa20.29■□□□□ 0.84
CHKB-209ENST00000481673 TTC9BQ8N6N2 239 aa20.29■□□□□ 0.84
CHKB-209ENST00000481673 TCP10LQ8TDR4 215 aa20.29■□□□□ 0.84
CHKB-209ENST00000481673 IQCGQ9H095 443 aaKnown RBP20.29■□□□□ 0.84
CHKB-209ENST00000481673 PRDM5Q9NQX1 630 aaPredicted RBP20.29■□□□□ 0.84
CHKB-209ENST00000481673 FGFR1OP2Q9NVK5 253 aa20.29■□□□□ 0.84
CHKB-209ENST00000481673 AFF4Q9UHB7 1163 aaKnown RBP20.29■□□□□ 0.84
CHKB-209ENST00000481673 USP15Q9Y4E8 981 aaPredicted RBP20.29■□□□□ 0.84
CHKB-209ENST00000481673 PLXNA3P51805 1871 aa20.29■□□□□ 0.84
CHKB-209ENST00000481673 SLC38A8A6NNN8 435 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 CXorf49A8MYA2 514 aaPredicted RBP20.28■□□□□ 0.84
CHKB-209ENST00000481673 USP1O94782 785 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 MNX1P50219 401 aaPredicted RBP20.28■□□□□ 0.84
CHKB-209ENST00000481673 PSMD5Q16401 504 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 FAM182AQ5T1J6 154 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 SNX30Q5VWJ9 437 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 TPGS2Q68CL5 300 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 TRMT10BQ6PF06 316 aaKnown RBP20.28■□□□□ 0.84
CHKB-209ENST00000481673 TAS1R1Q7RTX1 841 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 CCDC117Q8IWD4 279 aaPredicted RBP20.28■□□□□ 0.84
CHKB-209ENST00000481673 ZNF683Q8IZ20 524 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 ANKLE1Q8NAG6 615 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 OR52K1Q8NGK4 314 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 ACMSDQ8TDX5 336 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 GORASP1Q9BQQ3 440 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 CWH43Q9H720 699 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 TMEM39AQ9NV64 488 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 STARD13Q9Y3M8 1113 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 FAM237BA0A1B0GVD1 139 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 DRGXA6NNA5 263 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 COPEO14579 308 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 PIAS1O75925 651 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 VNN2O95498 520 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 GEMP55040 296 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 HNRNPDQ14103 355 aaKnown RBP20.28■□□□□ 0.84
CHKB-209ENST00000481673 SLC1A5Q15758 541 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 KLHDC10Q6PID8 442 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 TMEM173Q86WV6 379 aaPredicted RBP20.28■□□□□ 0.84
CHKB-209ENST00000481673 TOP1MTQ969P6 601 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 MLPHQ9BV36 600 aaPredicted RBP20.28■□□□□ 0.84
CHKB-209ENST00000481673 KDM4CQ9H3R0 1056 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 GLOD4Q9HC38 313 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 SMYD2Q9NRG4 433 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 SYBUQ9NX95 663 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 RPS6KL1Q9Y6S9 549 aa20.28■□□□□ 0.84
CHKB-209ENST00000481673 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.27■□□□□ 0.84
CHKB-209ENST00000481673 NEBLO76041 1014 aa20.27■□□□□ 0.84
CHKB-209ENST00000481673 UPP2O95045 317 aa20.27■□□□□ 0.84
CHKB-209ENST00000481673 RENBPP51606 427 aa20.27■□□□□ 0.84
CHKB-209ENST00000481673 NEK3P51956 506 aa20.27■□□□□ 0.84
CHKB-209ENST00000481673 NIPAL4Q0D2K0 466 aa20.27■□□□□ 0.84
CHKB-209ENST00000481673 RASIP1Q5U651 963 aa20.27■□□□□ 0.84
CHKB-209ENST00000481673 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.27■□□□□ 0.84
CHKB-209ENST00000481673 C14orf80Q86SX3 495 aa20.27■□□□□ 0.84
CHKB-209ENST00000481673 CHSY1Q86X52 802 aa20.27■□□□□ 0.84
CHKB-209ENST00000481673 CNTD1Q8N815 330 aa20.27■□□□□ 0.84
CHKB-209ENST00000481673 GPR152Q8TDT2 470 aa20.27■□□□□ 0.84
CHKB-209ENST00000481673 BCL7CQ8WUZ0 217 aaPredicted RBP20.27■□□□□ 0.84
CHKB-209ENST00000481673 SERAC1Q96JX3 654 aa20.27■□□□□ 0.84
CHKB-209ENST00000481673 CRISPLD1Q9H336 500 aa20.27■□□□□ 0.84
CHKB-209ENST00000481673 TXNDC16Q9P2K2 825 aa20.27■□□□□ 0.84
CHKB-209ENST00000481673 HCSTQ9UBK5 93 aa20.27■□□□□ 0.84
CHKB-209ENST00000481673 VWA8A3KMH1 1905 aa20.27■□□□□ 0.84
CHKB-209ENST00000481673 SLC12A8A0AV02 714 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 F5H423 210 aaPredicted RBP20.26■□□□□ 0.83
CHKB-209ENST00000481673 TLR5O60602 858 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 OAS1P00973 400 aaKnown RBP20.26■□□□□ 0.83
CHKB-209ENST00000481673 SOD2P04179 222 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 CSH1P0DML2 217 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 CSH2P0DML3 217 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 PYGBP11216 843 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 FOXN2P32314 431 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 OR1D2P34982 312 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 CCNFP41002 786 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 PAPOLAP51003 745 aaKnown RBP20.26■□□□□ 0.83
CHKB-209ENST00000481673 PRSS55Q6UWB4 352 aaPredicted RBP20.26■□□□□ 0.83
CHKB-209ENST00000481673 SPATA21Q7Z572 469 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 ZNF461Q8TAF7 563 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 ENTPD7Q9NQZ7 604 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 ZFATQ9P243 1243 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 STK39Q9UEW8 545 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 IPO11Q9UI26 975 aaKnown RBP20.26■□□□□ 0.83
CHKB-209ENST00000481673 DNMT3LQ9UJW3 386 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 MAFFQ9ULX9 164 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 ARL2BPQ9Y2Y0 163 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 TANC1Q9C0D5 1861 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 CLTBP09497 229 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 ATP5C1P36542 298 aaKnown RBP20.26■□□□□ 0.83
CHKB-209ENST00000481673 PBX3P40426 434 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 YBEYP58557 167 aaPredicted RBP20.26■□□□□ 0.83
CHKB-209ENST00000481673 STXBP5Q5T5C0 1151 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 RNF187Q5TA31 235 aaPredicted RBP20.26■□□□□ 0.83
CHKB-209ENST00000481673 MIB1Q86YT6 1006 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 TRIM42Q8IWZ5 723 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 GBP7Q8N8V2 638 aaPredicted RBP20.26■□□□□ 0.83
CHKB-209ENST00000481673 SERBP1Q8NC51 408 aaKnown RBP eCLIP20.26■□□□□ 0.83
CHKB-209ENST00000481673 NSMCE1Q8WV22 266 aa20.26■□□□□ 0.83
CHKB-209ENST00000481673 PTCD2Q8WV60 388 aaKnown RBP20.26■□□□□ 0.83
CHKB-209ENST00000481673 CERS2Q96G23 380 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms