RNA–Protein interactions for RNA: ENST00000481641.1

CLK1-211, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 690 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-211ENST00000481641 SND1Q7KZF4 910 aaKnown RBP eCLIP19.09■□□□□ 0.65
CLK1-211ENST00000481641 ADAT2Q7Z6V5 191 aaKnown RBP19.09■□□□□ 0.65
CLK1-211ENST00000481641 ERICH1Q86X53 443 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 XYLT1Q86Y38 959 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 OR2T34Q8NGX1 318 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 OR14C36Q8NHC7 312 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 RHBDD1Q8TEB9 315 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 C18orf8Q96DM3 657 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 WDCPQ9H6R7 721 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 ARHGEF38Q9NXL2 777 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 VPS28Q9UK41 221 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 FZD4Q9ULV1 537 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 OR51B4Q9Y5P0 310 aa19.09■□□□□ 0.65
CLK1-211ENST00000481641 TP53BP1Q12888 1972 aaPredicted RBP19.08■□□□□ 0.65
CLK1-211ENST00000481641 LRRC72A6NJI9 287 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 GOLGA8SH3BPF8 625 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 ADH1BP00325 375 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 WNT1P04628 370 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 MMEP08473 750 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 C5AR1P21730 350 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 DRD3P35462 400 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 CTSKP43235 329 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 GABRB2P47870 512 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 DEUP1Q05D60 604 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 SFSWAPQ12872 951 aaKnown RBP19.08■□□□□ 0.64
CLK1-211ENST00000481641 ELAVL3Q14576 367 aaKnown RBP19.08■□□□□ 0.64
CLK1-211ENST00000481641 DLG2Q15700 870 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 POM121L1PQ3SYA9 428 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 SMYD5Q6GMV2 418 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 TRNP1Q6NT89 227 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 ZDHHC17Q8IUH5 632 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 BAHD1Q8TBE0 780 aaPredicted RBP19.08■□□□□ 0.64
CLK1-211ENST00000481641 CPA5Q8WXQ8 436 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 VPS16Q9H269 839 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 SLC25A13Q9UJS0 675 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 RALYQ9UKM9 306 aaKnown RBP19.08■□□□□ 0.64
CLK1-211ENST00000481641 SARDHQ9UL12 918 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 PCDHGB2Q9Y5G2 931 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 WDFY3Q8IZQ1 3526 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 ZZEF1O43149 2961 aa19.08■□□□□ 0.64
CLK1-211ENST00000481641 GOLGA8CPA6NN73 597 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 F8VZ95 297 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 BNIP3LO60238 219 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 SNAP91O60641 907 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 CLDN11O75508 207 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 ATXN1LP0C7T5 689 aaKnown RBP19.07■□□□□ 0.64
CLK1-211ENST00000481641 FLT3P36888 993 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 ADPRHP54922 357 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 CDH4P55283 916 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 OXCT1P55809 520 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 PPP2CBP62714 309 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 RACK1P63244 317 aaKnown RBP19.07■□□□□ 0.64
CLK1-211ENST00000481641 PPP2CAP67775 309 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 C5orf22Q49AR2 442 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 Q6ZVU0 165 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 ZNF683Q8IZ20 524 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 SLC20A1Q8WUM9 679 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 ADAMTS14Q8WXS8 1223 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 NT5C3BQ969T7 300 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 SPAG5Q96R06 1193 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 PSMB7Q99436 277 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 STK33Q9BYT3 514 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 MUC3BQ9H195 1237 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 AASDHPPTQ9NRN7 309 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 RRN3Q9NYV6 651 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 MPP6Q9NZW5 540 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 STAP1Q9ULZ2 295 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 TBC1D30Q9Y2I9 924 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 DOCK9Q9BZ29 2069 aa19.07■□□□□ 0.64
CLK1-211ENST00000481641 CHD6Q8TD26 2715 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 TBC1D3DA0A087WVF3 549 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 TBC1D3IA0A087WXS9 549 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 TBC1D3EA0A087X179 549 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 TBC1D3KA0A087X1G2 549 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 TBC1D3FA6NER0 549 aaPredicted RBP19.06■□□□□ 0.64
CLK1-211ENST00000481641 C10orf142B7Z368 130 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 TBC1D3LB9A6J9 549 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 FLRT2O43155 660 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 ATP9BO43861 1147 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 RTN2O75298 545 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 MT-CO1P00395 513 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 TBC1D3HP0C7X1 549 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 ZNF18P17022 549 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 EEF1GP26641 437 aaKnown RBP19.06■□□□□ 0.64
CLK1-211ENST00000481641 C21orf59P57076 290 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 SLC25A52Q3SY17 297 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 BRMS1LQ5PSV4 323 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 NAA35Q5VZE5 725 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 TBC1D3GQ6DHY5 549 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 TBC1D3CQ6IPX1 549 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 LRSAM1Q6UWE0 723 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 PHLDB2Q86SQ0 1253 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 GLRX5Q86SX6 157 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 TBC1D3Q8IZP1 549 aaPredicted RBP19.06■□□□□ 0.64
CLK1-211ENST00000481641 SH2D3CQ8N5H7 860 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 ZCCHC14Q8WYQ9 949 aaKnown RBP19.06■□□□□ 0.64
CLK1-211ENST00000481641 OR8D1Q8WZ84 308 aa19.06■□□□□ 0.64
CLK1-211ENST00000481641 PGAP3Q96FM1 320 aaPredicted RBP19.06■□□□□ 0.64
CLK1-211ENST00000481641 ACE2Q9BYF1 805 aaPredicted RBP19.06■□□□□ 0.64
CLK1-211ENST00000481641 GANQ9H2C0 597 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms