RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 RAP2CQ9Y3L5 183 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 SMCHD1A6NHR9 2005 aa10.86□□□□□ -0.67
SIK3-210ENST00000480468 DLGAP1O14490 977 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 TRIM24O15164 1050 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 TRIM13O60858 407 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 JUNBP17275 347 aaPredicted RBP10.85□□□□□ -0.67
SIK3-210ENST00000480468 ITGB5P18084 799 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 TGM2P21980 687 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 MAP4P27816 1152 aaKnown RBP10.85□□□□□ -0.67
SIK3-210ENST00000480468 MIPP30301 263 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 CCT8P50990 548 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 PSME3P61289 254 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 PRAMEP78395 509 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 TRAF2Q12933 501 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 ZNF846Q147U1 533 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 SLC36A3Q495N2 470 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 TBC1D10BQ4KMP7 808 aaPredicted RBP10.85□□□□□ -0.67
SIK3-210ENST00000480468 CYP4A22Q5TCH4 519 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 SLC9A4Q6AI14 798 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 GALNT18Q6P9A2 607 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 ERMP1Q7Z2K6 904 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 SLC51AQ86UW1 340 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 CADM3Q8N126 398 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 JOSD2Q8TAC2 188 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 ZSCAN18Q8TBC5 510 aaPredicted RBP10.85□□□□□ -0.67
SIK3-210ENST00000480468 WNK4Q96J92 1243 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 FEM1CQ96JP0 617 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 DEFB129Q9H1M3 183 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 NANOGQ9H9S0 305 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 MAGEE1Q9HCI5 957 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 KCNH7Q9NS40 1196 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 DAPK2Q9UIK4 370 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 MID2Q9UJV3 735 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 SERPINA10Q9UK55 444 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 MRPL11Q9Y3B7 192 aaKnown RBP10.85□□□□□ -0.67
SIK3-210ENST00000480468 PCDHGA7Q9Y5G6 932 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 NOX1Q9Y5S8 564 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 STYXL1Q9Y6J8 313 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 SIPA1L1O43166 1804 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 PTPRJQ12913 1337 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 STRCQ7RTU9 1775 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 FER1L6Q2WGJ9 1857 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 H0YCG3 227 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 SOCS2O14508 198 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 DGKIO75912 1065 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 MLNP12872 115 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 ZNF182P17025 639 aaPredicted RBP10.85□□□□□ -0.67
SIK3-210ENST00000480468 FGFR3P22607 806 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 GARSP41250 739 aaKnown RBP10.85□□□□□ -0.67
SIK3-210ENST00000480468 RPL14P50914 215 aaKnown RBP10.85□□□□□ -0.67
SIK3-210ENST00000480468 KPNA1P52294 538 aaPredicted RBP10.85□□□□□ -0.67
SIK3-210ENST00000480468 PRKAA2P54646 552 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 NSUN2Q08J23 767 aaKnown RBP eCLIP10.85□□□□□ -0.67
SIK3-210ENST00000480468 MERTKQ12866 999 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 PDK2Q15119 407 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 VPS72Q15906 364 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 XKR9Q5GH70 373 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 PPP6R3Q5H9R7 873 aaPredicted RBP10.85□□□□□ -0.67
SIK3-210ENST00000480468 CDC42EP5Q6NZY7 148 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 ABRAXAS1Q6UWZ7 409 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 NAPRTQ6XQN6 538 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 MPP5Q8N3R9 675 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 TTC30BQ8N4P2 665 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 LINC00116Q8NCU8 138 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 RAB2BQ8WUD1 216 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 BSNDQ8WZ55 320 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 CGRRF1Q99675 332 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 SH2D3AQ9BRG2 576 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 CDCA7Q9BWT1 371 aaPredicted RBP10.85□□□□□ -0.67
SIK3-210ENST00000480468 WDR55Q9H6Y2 383 aaPredicted RBP10.85□□□□□ -0.67
SIK3-210ENST00000480468 NOL11Q9H8H0 719 aaKnown RBP10.85□□□□□ -0.67
SIK3-210ENST00000480468 C20orf96Q9NUD7 363 aaPredicted RBP10.85□□□□□ -0.67
SIK3-210ENST00000480468 ANKMY1Q9P2S6 941 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 PSME2Q9UL46 239 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 USP18Q9UMW8 372 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 TCAF1Q9Y4C2 921 aa10.85□□□□□ -0.67
SIK3-210ENST00000480468 HEATR9A2RTY3 570 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 ZNF839A8K0R7 811 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 CLDN25C9JDP6 229 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 G3V2L1 256 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 NDUFB5O43674 189 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 TYK2P29597 1187 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 HLCSP50747 726 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 ATXN3P54252 364 aaPredicted RBP10.84□□□□□ -0.67
SIK3-210ENST00000480468 YWHAEP62258 255 aaKnown RBP10.84□□□□□ -0.67
SIK3-210ENST00000480468 GNA12Q03113 381 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 DGKDQ16760 1214 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 C6orf183Q5T699 404 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 KCTD8Q6ZWB6 473 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 MCF2L2Q86YR7 1114 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 ZC3H7AQ8IWR0 971 aaKnown RBP10.84□□□□□ -0.67
SIK3-210ENST00000480468 ANKRD13AQ8IZ07 590 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 PLD5Q8N7P1 536 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 ATP6V0D2Q8N8Y2 350 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 SEPT8Q92599 483 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 TMA16Q96EY4 203 aaKnown RBP10.84□□□□□ -0.67
SIK3-210ENST00000480468 RNF157Q96PX1 679 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 RMDN3Q96TC7 470 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 IMPG2Q9BZV3 1241 aa10.84□□□□□ -0.67
SIK3-210ENST00000480468 NAA50Q9GZZ1 169 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms