RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 IFNAR2P48551 515 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 NRLP54845 237 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 GNA12Q03113 381 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 PARP15Q460N3 678 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 HABP4Q5JVS0 413 aaKnown RBP18■□□□□ 0.47
UPF3A-206ENST00000480362 FYB2Q5VWT5 728 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 DUPD1Q68J44 220 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 CXorf57Q6NSI4 855 aaKnown RBP18■□□□□ 0.47
UPF3A-206ENST00000480362 LRRC49Q8IUZ0 686 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 CCDC13Q8IYE1 715 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 DEFB123Q8N688 67 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 OSCP1Q8WVF1 389 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 ARHGEF2Q92974 986 aaKnown RBP18■□□□□ 0.47
UPF3A-206ENST00000480362 E2F7Q96AV8 911 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 RTP4Q96DX8 246 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 TSGA13Q96PP4 275 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 PNKPQ96T60 521 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 FERMT1Q9BQL6 677 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 PARD6BQ9BYG5 372 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 DPH5Q9H2P9 285 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 UBE2ZQ9H832 354 aaPredicted RBP18■□□□□ 0.47
UPF3A-206ENST00000480362 PCDH9Q9HC56 1237 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 THG1LQ9NWX6 298 aaKnown RBP18■□□□□ 0.47
UPF3A-206ENST00000480362 SEPT10Q9P0V9 454 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 ASIC3Q9UHC3 531 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 SNX24Q9Y343 169 aa18■□□□□ 0.47
UPF3A-206ENST00000480362 ESYT3A0FGR9 886 aa17.99■□□□□ 0.47
UPF3A-206ENST00000480362 RPL22P35268 128 aaKnown RBP17.99■□□□□ 0.47
UPF3A-206ENST00000480362 VPS41P49754 854 aa17.99■□□□□ 0.47
UPF3A-206ENST00000480362 ZNF33AQ06730 810 aa17.99■□□□□ 0.47
UPF3A-206ENST00000480362 TRADDQ15628 312 aa17.99■□□□□ 0.47
UPF3A-206ENST00000480362 ANO4Q32M45 955 aa17.99■□□□□ 0.47
UPF3A-206ENST00000480362 FSCBQ5H9T9 825 aa17.99■□□□□ 0.47
UPF3A-206ENST00000480362 LY6G5CQ5SRR4 150 aa17.99■□□□□ 0.47
UPF3A-206ENST00000480362 FAM182AQ5T1J6 154 aa17.99■□□□□ 0.47
UPF3A-206ENST00000480362 RNF219Q5W0B1 726 aaPredicted RBP17.99■□□□□ 0.47
UPF3A-206ENST00000480362 RHBDF2Q6PJF5 856 aa17.99■□□□□ 0.47
UPF3A-206ENST00000480362 VITQ6UXI7 678 aa17.99■□□□□ 0.47
UPF3A-206ENST00000480362 ZNF354CQ86Y25 554 aa17.99■□□□□ 0.47
UPF3A-206ENST00000480362 MFN1Q8IWA4 741 aa17.99■□□□□ 0.47
UPF3A-206ENST00000480362 CCDC117Q8IWD4 279 aaPredicted RBP17.99■□□□□ 0.47
UPF3A-206ENST00000480362 IFT20Q8IY31 132 aa17.99■□□□□ 0.47
UPF3A-206ENST00000480362 OR7D4Q8NG98 312 aa17.99■□□□□ 0.47
UPF3A-206ENST00000480362 CASKIN2Q8WXE0 1202 aa17.99■□□□□ 0.47
UPF3A-206ENST00000480362 BBS2Q9BXC9 721 aa17.99■□□□□ 0.47
UPF3A-206ENST00000480362 PLA2G2FQ9BZM2 168 aa17.99■□□□□ 0.47
UPF3A-206ENST00000480362 GDF3Q9NR23 364 aa17.99■□□□□ 0.47
UPF3A-206ENST00000480362 IPO11Q9UI26 975 aaKnown RBP17.99■□□□□ 0.47
UPF3A-206ENST00000480362 DENND4AQ7Z401 1863 aa17.99■□□□□ 0.47
UPF3A-206ENST00000480362 A0A0D9SEW6 157 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 C5orf60A6NFR6 353 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 NEDD8-MDP1E9PL57 170 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 KCNK1O00180 336 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 GCATO75600 419 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 ZNF189O75820 626 aaPredicted RBP17.98■□□□□ 0.47
UPF3A-206ENST00000480362 PENKP01210 267 aaPredicted RBP17.98■□□□□ 0.47
UPF3A-206ENST00000480362 ADCY8P40145 1251 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 SERINC3Q13530 473 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 CDH18Q13634 790 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 P3H1Q32P28 736 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 EML3Q32P44 896 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 RNF43Q68DV7 783 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 TRIM68Q6AZZ1 485 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 TIGD7Q6NT04 549 aaPredicted RBP17.98■□□□□ 0.47
UPF3A-206ENST00000480362 PARM1Q6UWI2 310 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 OTOP3Q7RTS5 596 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 MFSD6LQ8IWD5 586 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 CCDC110Q8TBZ0 833 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 WFDC5Q8TCV5 224 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 CCHCR1Q8TD31 782 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 ASIC4Q96FT7 647 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 ZFYVE19Q96K21 471 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 KXD1Q9BQD3 176 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 SPON2Q9BUD6 331 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 CLEC4EQ9ULY5 219 aa17.98■□□□□ 0.47
UPF3A-206ENST00000480362 NYNRINQ9P2P1 1898 aaKnown RBP17.97■□□□□ 0.47
UPF3A-206ENST00000480362 J3KR12 359 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 RNF103O00237 685 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 MATN3O15232 486 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 MTSS1O43312 755 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 MBTPS2O43462 519 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 STK10O94804 968 aaKnown RBP17.97■□□□□ 0.47
UPF3A-206ENST00000480362 IVDP26440 423 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 MZF1P28698 734 aaPredicted RBP17.97■□□□□ 0.47
UPF3A-206ENST00000480362 ACTN2P35609 894 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 RPL21P46778 160 aaKnown RBP17.97■□□□□ 0.47
UPF3A-206ENST00000480362 NUMBP49757 651 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 CLCN6P51797 869 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 DRG2P55039 364 aaKnown RBP17.97■□□□□ 0.47
UPF3A-206ENST00000480362 IL10RBQ08334 325 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 WASHC5Q12768 1159 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 GPS1Q13098 491 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 SMAD4Q13485 552 aaKnown RBP17.97■□□□□ 0.47
UPF3A-206ENST00000480362 DHCR24Q15392 516 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 ANKRD20A2Q5SQ80 823 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 ANKRD20A1Q5TYW2 823 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 ANKRD20A3Q5VUR7 823 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 IL31Q6EBC2 164 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 ZNF783Q6ZMS7 281 aa17.97■□□□□ 0.47
UPF3A-206ENST00000480362 FIBINQ8TAL6 211 aa17.97■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms