RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 CLDN11O75508 207 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 UNGP13051 313 aaPredicted RBP6.09□□□□□ -1.43
CPS1-207ENST00000479988 WARSP23381 471 aaKnown RBP6.09□□□□□ -1.43
CPS1-207ENST00000479988 TIE1P35590 1138 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 SLCO1A2P46721 670 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 PEX5P50542 639 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 EIF3EP60228 445 aaKnown RBP6.09□□□□□ -1.43
CPS1-207ENST00000479988 GRM3Q14832 879 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 SETMARQ53H47 684 aaPredicted RBP6.09□□□□□ -1.43
CPS1-207ENST00000479988 PTRHD1Q6GMV3 140 aaKnown RBP6.09□□□□□ -1.43
CPS1-207ENST00000479988 SPOCD1Q6ZMY3 1216 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 C1orf127Q8N9H9 656 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 IPMKQ8NFU5 416 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 SETD7Q8WTS6 366 aaKnown RBP6.09□□□□□ -1.43
CPS1-207ENST00000479988 CD101Q93033 1021 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 ART4Q93070 314 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 PLD4Q96BZ4 506 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 AGAP3Q96P47 875 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 MRPL45Q9BRJ2 306 aaKnown RBP6.09□□□□□ -1.43
CPS1-207ENST00000479988 MINDY3Q9H8M7 445 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 SMYD2Q9NRG4 433 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 LATS2Q9NRM7 1088 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 CAMSAP3Q9P1Y5 1249 aaPredicted RBP6.09□□□□□ -1.43
CPS1-207ENST00000479988 CNTN3Q9P232 1028 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 PAK5Q9P286 719 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 AJAP1Q9UKB5 411 aaPredicted RBP6.09□□□□□ -1.43
CPS1-207ENST00000479988 DNPEPQ9ULA0 475 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 VPS9D1Q9Y2B5 631 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 ANKRD31Q8N7Z5 1873 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 RASA4BC9J798 803 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 AGPSO00116 658 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 RASA4O43374 803 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 DGKIO75912 1065 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 DPP6P42658 865 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 RPL21P46778 160 aaKnown RBP6.09□□□□□ -1.43
CPS1-207ENST00000479988 RPIAP49247 311 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 GEMP55040 296 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 CLDN10P78369 228 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 RAB33AQ14088 237 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 BBS9Q3SYG4 887 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 NAPEPLDQ6IQ20 393 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 DNAAF5Q86Y56 855 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 PPIL6Q8IXY8 311 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 CCDC33Q8N5R6 958 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 SEC14L1Q92503 715 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 BTN2A3PQ96KV6 586 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 EGFL8Q99944 293 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 ATP13A3Q9H7F0 1226 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 ACTL7BQ9Y614 415 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 NRXN2Q9P2S2 1712 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 A0A1W2PQH9 124 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 E5RJQ4 531 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 RIPK2O43353 540 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 ATP2C2O75185 946 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 KRT37O76014 449 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 MT-ND3P03897 115 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 EPCAMP16422 314 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 TSHRP16473 764 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 AMD1P17707 334 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 LIG3P49916 1009 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 VCPP55072 806 aaKnown RBP6.09□□□□□ -1.43
CPS1-207ENST00000479988 MAP7D1Q3KQU3 841 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 TTLL9Q3SXZ7 439 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 AARS2Q5JTZ9 985 aaKnown RBP6.09□□□□□ -1.43
CPS1-207ENST00000479988 BRMS1LQ5PSV4 323 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 ARMC12Q5T9G4 340 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 DNAJC5GQ8N7S2 189 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 FAM3CQ92520 227 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 PCED1BQ96HM7 432 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 BTBD6Q96KE9 485 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 MYCBPQ99417 103 aaPredicted RBP6.09□□□□□ -1.43
CPS1-207ENST00000479988 CYTH2Q99418 400 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 CDX2Q99626 313 aaPredicted RBP6.09□□□□□ -1.43
CPS1-207ENST00000479988 SYT11Q9BT88 431 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 ZYG11BQ9C0D3 744 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 CXXC1Q9P0U4 656 aaPredicted RBP6.09□□□□□ -1.43
CPS1-207ENST00000479988 SLC24A2Q9UI40 661 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 PRDM4Q9UKN5 801 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 LOXHD1Q8IVV2 1947 aa6.09□□□□□ -1.43
CPS1-207ENST00000479988 IGKV6D-21A0A0A0MT36 114 aa6.09□□□□□ -1.44
CPS1-207ENST00000479988 HEPACAM2A8MVW5 462 aa6.09□□□□□ -1.44
CPS1-207ENST00000479988 CST8O60676 142 aa6.09□□□□□ -1.44
CPS1-207ENST00000479988 SNX2O60749 519 aa6.09□□□□□ -1.44
CPS1-207ENST00000479988 PMPCBO75439 489 aa6.09□□□□□ -1.44
CPS1-207ENST00000479988 GMNNO75496 209 aa6.09□□□□□ -1.44
CPS1-207ENST00000479988 RFPL2O75678 378 aa6.09□□□□□ -1.44
CPS1-207ENST00000479988 ITGB1P05556 798 aa6.09□□□□□ -1.44
CPS1-207ENST00000479988 CXCL12P48061 93 aa6.09□□□□□ -1.44
CPS1-207ENST00000479988 PSMD8P48556 350 aa6.09□□□□□ -1.44
CPS1-207ENST00000479988 RGS4P49798 205 aa6.09□□□□□ -1.44
CPS1-207ENST00000479988 ASPHQ12797 758 aa6.09□□□□□ -1.44
CPS1-207ENST00000479988 RPS6KA2Q15349 733 aa6.09□□□□□ -1.44
CPS1-207ENST00000479988 TAF1BQ53T94 588 aaPredicted RBP6.09□□□□□ -1.44
CPS1-207ENST00000479988 DAB2IPQ5VWQ8 1189 aa6.09□□□□□ -1.44
CPS1-207ENST00000479988 CDCA2Q69YH5 1023 aaPredicted RBP6.09□□□□□ -1.44
CPS1-207ENST00000479988 DRICH1Q6PGQ1 229 aaPredicted RBP6.09□□□□□ -1.44
CPS1-207ENST00000479988 CAPN12Q6ZSI9 719 aa6.09□□□□□ -1.44
CPS1-207ENST00000479988 YTHDF3Q7Z739 585 aaKnown RBP6.09□□□□□ -1.44
CPS1-207ENST00000479988 ARHGAP24Q8N264 748 aa6.09□□□□□ -1.44
CPS1-207ENST00000479988 OR2W6PQ8NHA6 318 aa6.09□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms