RNA–Protein interactions for RNA: ENST00000479602.5

DDX56-211, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-211ENST00000479602 TCAF2A6NFQ2 919 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 DRGXA6NNA5 263 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 PRRT4C9JH25 899 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 GOLGA8SH3BPF8 625 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 I6L893 689 aaPredicted RBP9.18□□□□□ -0.94
DDX56-211ENST00000479602 PSTPIP1O43586 416 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 GJB3O75712 270 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 ALDH1A2O94788 518 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 KRT7P08729 469 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 GABRG2P18507 467 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 ABCB4P21439 1286 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 CORO1AP31146 461 aaKnown RBP9.18□□□□□ -0.94
DDX56-211ENST00000479602 PITX1P78337 314 aaPredicted RBP9.18□□□□□ -0.94
DDX56-211ENST00000479602 ACACAQ13085 2346 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 SLC12A1Q13621 1099 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 EIF4HQ15056 248 aaKnown RBP9.18□□□□□ -0.94
DDX56-211ENST00000479602 TAZQ16635 292 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 MPPE1Q53F39 396 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 C2CD6Q53TS8 623 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 MS4A13Q5J8X5 152 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 SH3PXD2AQ5TCZ1 1133 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 PIK3R6Q5UE93 754 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 DAB2IPQ5VWQ8 1189 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 PSAPL1Q6NUJ1 521 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 METTL3Q86U44 580 aaKnown RBP9.18□□□□□ -0.94
DDX56-211ENST00000479602 SYCE1Q8N0S2 351 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 ARFGAP1Q8N6T3 406 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 EMC1Q8N766 993 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 TERB1Q8NA31 727 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 KDM1BQ8NB78 822 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 HJURPQ8NCD3 748 aaPredicted RBP9.18□□□□□ -0.94
DDX56-211ENST00000479602 NDRG1Q92597 394 aaKnown RBP9.18□□□□□ -0.94
DDX56-211ENST00000479602 GATA6Q92908 595 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 FAF2Q96CS3 445 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 ZNF419Q96HQ0 510 aaPredicted RBP9.18□□□□□ -0.94
DDX56-211ENST00000479602 ACOX2Q99424 681 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 KCNF1Q9H3M0 494 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 POLMQ9NP87 494 aaPredicted RBP9.18□□□□□ -0.94
DDX56-211ENST00000479602 ZDHHC4Q9NPG8 344 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 TMEM9BQ9NQ34 198 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 BAHCC1Q9P281 2608 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 CTTNBP2NLQ9P2B4 639 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 DEC1Q9P2X7 70 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 ZNF212Q9UDV6 495 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 EFR3BQ9Y2G0 817 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 TBC1D30Q9Y2I9 924 aa9.18□□□□□ -0.94
DDX56-211ENST00000479602 THADAQ6YHU6 1953 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 IGHV1OR15-9A0A0B4J2B8 117 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 TBC1D3BA6NDS4 549 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 RCCD1A6NED2 376 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 TMCO5BA8MYB1 307 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 MIF4GDA9UHW6 222 aaKnown RBP9.17□□□□□ -0.94
DDX56-211ENST00000479602 C1QTNF9BB2RNN3 333 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 PIK3R2O00459 728 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 NPC1O15118 1278 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 FGF10O15520 208 aaPredicted RBP9.17□□□□□ -0.94
DDX56-211ENST00000479602 ZSCAN12O43309 604 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 ATMINO43313 823 aaPredicted RBP9.17□□□□□ -0.94
DDX56-211ENST00000479602 MSI1O43347 362 aaKnown RBP9.17□□□□□ -0.94
DDX56-211ENST00000479602 CLDN11O75508 207 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 GRAP2O75791 330 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 TOP3BO95985 862 aaKnown RBP9.17□□□□□ -0.94
DDX56-211ENST00000479602 ABL1P00519 1130 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 C1QTNF9P0C862 333 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 ITPKAP23677 461 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 PSMA2P25787 234 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 MIPP30301 263 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 NTSR1P30989 418 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 PTPN7P35236 360 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 DPP6P42658 865 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 MAPKAPK2P49137 400 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 NOVA1P51513 510 aaKnown RBP9.17□□□□□ -0.94
DDX56-211ENST00000479602 LMAN2Q12907 356 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 BYSLQ13895 437 aaKnown RBP9.17□□□□□ -0.94
DDX56-211ENST00000479602 PDK2Q15119 407 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 HADHQ16836 314 aaKnown RBP9.17□□□□□ -0.94
DDX56-211ENST00000479602 ZC3H12AQ5D1E8 599 aaKnown RBP9.17□□□□□ -0.94
DDX56-211ENST00000479602 RABGAP1LQ5R372 815 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 FYB2Q5VWT5 728 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 NADSYN1Q6IA69 706 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 LPCAT2Q7L5N7 544 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 CYP2U1Q7Z449 544 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 SETD3Q86TU7 594 aaPredicted RBP9.17□□□□□ -0.94
DDX56-211ENST00000479602 SLC41A1Q8IVJ1 513 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 TMEFF1Q8IYR6 380 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 NAT16Q8N8M0 369 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 TTC16Q8NEE8 873 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 TRIM58Q8NG06 486 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 TPCN2Q8NHX9 752 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 TSC1Q92574 1164 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 PIGKQ92643 395 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 FATE1Q969F0 183 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 ZNF670Q9BS34 389 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 LACRTQ9GZZ8 138 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 TKTL2Q9H0I9 626 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 OSGEPQ9NPF4 335 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 SFMBT1Q9UHJ3 866 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 FZD10Q9ULW2 581 aa9.17□□□□□ -0.94
DDX56-211ENST00000479602 NBEAQ8NFP9 2946 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms