RNA–Protein interactions for RNA: ENST00000479530.5

PDZRN3-208, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 2 BASIC

Gene PDZRN3, Length 2,778 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-208ENST00000479530 DPP6P42658 865 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 STXBP5Q5T5C0 1151 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 AMIGO2Q86SJ2 522 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 SNX32Q86XE0 403 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 MAP7D3Q8IWC1 876 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 ARNTL2Q8WYA1 636 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 SLC4A5Q9BY07 1137 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 MRPL1Q9BYD6 325 aaKnown RBP13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 DHX35Q9H5Z1 703 aaKnown RBP13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 GOLGA2P5Q9HBQ8 144 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 C6orf203Q9P0P8 240 aaPredicted RBP13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 STK39Q9UEW8 545 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 SPTLC1O15269 473 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 CFLARO15519 480 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 TRPA1O75762 1119 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 ALDH1A2O94788 518 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 GRK2P25098 689 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 TYK2P29597 1187 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 SDC4P31431 198 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 MLH1P40692 756 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 GALK1P51570 392 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 PGGT1BP53609 377 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 EMP3P54852 163 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 DLG2Q15700 870 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 ANKRD23Q86SG2 305 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 TICAM1Q8IUC6 712 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 TP53INP2Q8IXH6 220 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 LRGUKQ96M69 825 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 MPHOSPH6Q99547 160 aaKnown RBP13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 PKP2Q99959 881 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 RTKNQ9BST9 563 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 NXF3Q9H4D5 531 aaKnown RBP13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 LIN28AQ9H9Z2 209 aaKnown RBP13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 DCDC2Q9UHG0 476 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 GCATO75600 419 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 SNAI1O95863 264 aaPredicted RBP13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 CHRNGP07510 517 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 MYL4P12829 197 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 CPA3P15088 417 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 NELFEP18615 380 aaKnown RBP13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 TPSB2P20231 275 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 RPL26P61254 145 aaKnown RBP13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 IRF9Q00978 393 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 LAMC2Q13753 1193 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 ADGRE1Q14246 886 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 FLOT2Q14254 428 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 TPSAB1Q15661 275 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 GRIK4Q16099 956 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 TMEM259Q4ZIN3 620 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 DUS1LQ6P1R4 473 aaKnown RBP13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 TMEM110Q86TL2 294 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 IFNLR1Q8IU57 520 aaPredicted RBP13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 DSELQ8IZU8 1212 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 FAM156AQ8NDB6 213 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 GRIN3AQ8TCU5 1115 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 KBTBD7Q8WVZ9 684 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 GAB3Q8WWW8 586 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 ATP2A3Q93084 1043 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 RNF39Q9H2S5 420 aa13.6□□□□□ -0.23
PDZRN3-208ENST00000479530 LTFP02788 710 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 CNTFP26441 200 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 EPHA3P29320 983 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 CEACAM7Q14002 265 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 PDK2Q15119 407 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 ZNF792Q3KQV3 632 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 BOLA3Q53S33 107 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 TMEM198Q66K66 360 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 STEAP4Q687X5 459 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 CEP70Q8NHQ1 597 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 ACMSDQ8TDX5 336 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 LGMNQ99538 433 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 CDH19Q9H159 772 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 MROH8Q9H579 483 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 CAB39LQ9H9S4 337 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 OTOFQ9HC10 1997 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 CACNG4Q9UBN1 327 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 SYNJ2BP-COX16A0A087WUM0 186 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 ZSCAN9O15535 394 aaPredicted RBP13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 HSPA4LO95757 839 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 SMPD1P17405 629 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 TCN1P20061 433 aaPredicted RBP13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 PIK3R1P27986 724 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 SEMA5AQ13591 1074 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 APOFQ13790 326 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 DBN1Q16643 649 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 ZNF423Q2M1K9 1284 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 BHLHE22Q8NFJ8 381 aaPredicted RBP13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 TMIGD2Q96BF3 282 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 MARK4Q96L34 752 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 ZNF512Q96ME7 567 aaPredicted RBP13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 KLHL32Q96NJ5 620 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 KCTD15Q96SI1 283 aaPredicted RBP13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 OSMRQ99650 979 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 MRPS26Q9BYN8 205 aaKnown RBP13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 KATNBL1Q9H079 304 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 RNF181Q9P0P0 153 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 COX16Q9P0S2 106 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 HESX1Q9UBX0 185 aa13.59□□□□□ -0.23
PDZRN3-208ENST00000479530 PCDHB12Q9Y5F1 795 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms