RNA–Protein interactions for RNA: ENST00000478214.1

HMGA1-206, Transcript of high mobility group AT-hook 1, humanhuman

TSL 1 (best)

Gene HMGA1, Length 716 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-206ENST00000478214 OR7D4Q8NG98 312 aa16■□□□□ 0.15
HMGA1-206ENST00000478214 TBC1D31Q96DN5 1066 aa16■□□□□ 0.15
HMGA1-206ENST00000478214 DNAJC7Q99615 494 aa16■□□□□ 0.15
HMGA1-206ENST00000478214 RBSNQ9H1K0 784 aa16■□□□□ 0.15
HMGA1-206ENST00000478214 SMOC1Q9H4F8 434 aa16■□□□□ 0.15
HMGA1-206ENST00000478214 FBRSQ9HAH7 460 aa16■□□□□ 0.15
HMGA1-206ENST00000478214 FZD10Q9ULW2 581 aa16■□□□□ 0.15
HMGA1-206ENST00000478214 NEU3Q9UQ49 428 aa16■□□□□ 0.15
HMGA1-206ENST00000478214 PCDHGA5Q9Y5G8 931 aa16■□□□□ 0.15
HMGA1-206ENST00000478214 SCINQ9Y6U3 715 aa16■□□□□ 0.15
HMGA1-206ENST00000478214 CKAP5Q14008 2032 aa16■□□□□ 0.15
HMGA1-206ENST00000478214 EDDM13A0A1B0GTR0 161 aa15.99■□□□□ 0.15
HMGA1-206ENST00000478214 ILVBLA1L0T0 632 aa15.99■□□□□ 0.15
HMGA1-206ENST00000478214 TARSL2A2RTX5 802 aaKnown RBP15.99■□□□□ 0.15
HMGA1-206ENST00000478214 VAV1P15498 845 aa15.99■□□□□ 0.15
HMGA1-206ENST00000478214 RHOQP17081 205 aa15.99■□□□□ 0.15
HMGA1-206ENST00000478214 DESP17661 470 aa15.99■□□□□ 0.15
HMGA1-206ENST00000478214 MPLP40238 635 aa15.99■□□□□ 0.15
HMGA1-206ENST00000478214 NNMTP40261 264 aa15.99■□□□□ 0.15
HMGA1-206ENST00000478214 CSRP2Q16527 193 aa15.99■□□□□ 0.15
HMGA1-206ENST00000478214 CCDC122Q5T0U0 273 aa15.99■□□□□ 0.15
HMGA1-206ENST00000478214 ALKBH5Q6P6C2 394 aaKnown RBP15.99■□□□□ 0.15
HMGA1-206ENST00000478214 PTPRN2Q92932 1015 aa15.99■□□□□ 0.15
HMGA1-206ENST00000478214 TOE1Q96GM8 510 aaKnown RBP15.99■□□□□ 0.15
HMGA1-206ENST00000478214 SPON2Q9BUD6 331 aa15.99■□□□□ 0.15
HMGA1-206ENST00000478214 TRIM5Q9C035 493 aa15.99■□□□□ 0.15
HMGA1-206ENST00000478214 THAP2Q9H0W7 228 aa15.99■□□□□ 0.15
HMGA1-206ENST00000478214 MRPL47Q9HD33 250 aaKnown RBP15.99■□□□□ 0.15
HMGA1-206ENST00000478214 NDFIP2Q9NV92 336 aa15.99■□□□□ 0.15
HMGA1-206ENST00000478214 WSB2Q9NYS7 404 aaPredicted RBP15.99■□□□□ 0.15
HMGA1-206ENST00000478214 VPS51Q9UID3 782 aa15.99■□□□□ 0.15
HMGA1-206ENST00000478214 SLC25A13Q9UJS0 675 aa15.99■□□□□ 0.15
HMGA1-206ENST00000478214 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.99■□□□□ 0.15
HMGA1-206ENST00000478214 MFAP3LO75121 409 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 MT-CO1P00395 513 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 TPM1P09493 284 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 C7P10643 843 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 GLDCP23378 1020 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 CD6P30203 668 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 L1CAMP32004 1257 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 VASPP50552 380 aaPredicted RBP15.98■□□□□ 0.15
HMGA1-206ENST00000478214 ADKP55263 362 aaKnown RBP15.98■□□□□ 0.15
HMGA1-206ENST00000478214 KRT83P78385 493 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 GNA12Q03113 381 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 SF3A2Q15428 464 aaKnown RBP15.98■□□□□ 0.15
HMGA1-206ENST00000478214 SPDYCQ5MJ68 293 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 PLA2G2CQ5R387 149 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 ZNF776Q68DI1 518 aaPredicted RBP15.98■□□□□ 0.15
HMGA1-206ENST00000478214 CYP2U1Q7Z449 544 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 NLRP14Q86W24 1093 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 GAS2L3Q86XJ1 694 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 STK40Q8N2I9 435 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 FNIP1Q8TF40 1166 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 FRS2Q8WU20 508 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 ARHGEF26Q96DR7 871 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 FAM129BQ96TA1 746 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 C2orf49Q9BVC5 232 aaPredicted RBP15.98■□□□□ 0.15
HMGA1-206ENST00000478214 RSPH9Q9H1X1 276 aaPredicted RBP15.98■□□□□ 0.15
HMGA1-206ENST00000478214 ABHD10Q9NUJ1 306 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 ZNHIT6Q9NWK9 470 aaKnown RBP15.98■□□□□ 0.15
HMGA1-206ENST00000478214 GPATCH2LQ9NWQ4 482 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 PCSK1NQ9UHG2 260 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 NENFQ9UMX5 172 aa15.98■□□□□ 0.15
HMGA1-206ENST00000478214 DMXL1Q9Y485 3027 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 CEP250Q9BV73 2442 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 GON4LQ3T8J9 2241 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 ATP9BO43861 1147 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 CREB3O43889 395 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 NDUFS2O75306 463 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 IGLV3-19P01714 112 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 DNTTP04053 509 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 CYP1A2P05177 515 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 ZNF806P0C7X5 589 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 SRCP12931 536 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 GALCP54803 685 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 AIF1P55008 147 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 ZBTB16Q05516 673 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 GFPT1Q06210 699 aaPredicted RBP15.97■□□□□ 0.15
HMGA1-206ENST00000478214 TBX2Q13207 712 aaPredicted RBP15.97■□□□□ 0.15
HMGA1-206ENST00000478214 SEMA3BQ13214 749 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 DLG2Q15700 870 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 TSR1Q2NL82 804 aaKnown RBP15.97■□□□□ 0.15
HMGA1-206ENST00000478214 ASTE1Q2TB18 679 aaPredicted RBP15.97■□□□□ 0.15
HMGA1-206ENST00000478214 ACCSLQ4AC99 568 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 LYSMD4Q5XG99 296 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 TCEAL6Q6IPX3 200 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 LINGO4Q6UY18 593 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 ZNF783Q6ZMS7 281 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 PRR23CQ6ZRP0 262 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 FAM124AQ86V42 546 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 MMAAQ8IVH4 418 aaKnown RBP15.97■□□□□ 0.15
HMGA1-206ENST00000478214 SLC41A1Q8IVJ1 513 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 SH2D3CQ8N5H7 860 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 DCAF4L2Q8NA75 395 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 PIGKQ92643 395 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 TCEAL3Q969E4 200 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 PEBP4Q96S96 227 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 CHP1Q99653 195 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 EPAS1Q99814 870 aa15.97■□□□□ 0.15
HMGA1-206ENST00000478214 GPR174Q9BXC1 333 aa15.97■□□□□ 0.15
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