RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 PCDHGC3Q9UN70 934 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 OR51B4Q9Y5P0 310 aa17.21■□□□□ 0.35
TRIM13-208ENST00000478111 KALRNO60229 2985 aa17.2■□□□□ 0.34
TRIM13-208ENST00000478111 SYNJ2BP-COX16A0A087WUM0 186 aa17.2■□□□□ 0.34
TRIM13-208ENST00000478111 TLR4O00206 839 aa17.2■□□□□ 0.34
TRIM13-208ENST00000478111 ATP9BO43861 1147 aa17.2■□□□□ 0.34
TRIM13-208ENST00000478111 GRAP2O75791 330 aa17.2■□□□□ 0.34
TRIM13-208ENST00000478111 SLC2A3P11169 496 aa17.2■□□□□ 0.34
TRIM13-208ENST00000478111 NNMTP40261 264 aa17.2■□□□□ 0.34
TRIM13-208ENST00000478111 NXPH1P58417 271 aa17.2■□□□□ 0.34
TRIM13-208ENST00000478111 CENPCQ03188 943 aa17.2■□□□□ 0.34
TRIM13-208ENST00000478111 AUHQ13825 339 aaKnown RBP17.2■□□□□ 0.34
TRIM13-208ENST00000478111 INAVAQ3KP66 663 aa17.2■□□□□ 0.34
TRIM13-208ENST00000478111 C5orf22Q49AR2 442 aa17.2■□□□□ 0.34
TRIM13-208ENST00000478111 CCDC157Q569K6 752 aa17.2■□□□□ 0.34
TRIM13-208ENST00000478111 EFHC1Q5JVL4 640 aa17.2■□□□□ 0.34
TRIM13-208ENST00000478111 C14orf80Q86SX3 495 aa17.2■□□□□ 0.34
TRIM13-208ENST00000478111 SKA1Q96BD8 255 aa17.2■□□□□ 0.34
TRIM13-208ENST00000478111 SERAC1Q96JX3 654 aa17.2■□□□□ 0.34
TRIM13-208ENST00000478111 FEM1AQ9BSK4 669 aa17.2■□□□□ 0.34
TRIM13-208ENST00000478111 SIX2Q9NPC8 291 aa17.2■□□□□ 0.34
TRIM13-208ENST00000478111 COX16Q9P0S2 106 aa17.2■□□□□ 0.34
TRIM13-208ENST00000478111 AJAP1Q9UKB5 411 aaPredicted RBP17.2■□□□□ 0.34
TRIM13-208ENST00000478111 HS3ST4Q9Y661 456 aa17.2■□□□□ 0.34
TRIM13-208ENST00000478111 TDRD6O60522 2096 aaKnown RBP17.2■□□□□ 0.34
TRIM13-208ENST00000478111 TBC1D3DA0A087WVF3 549 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 TBC1D3IA0A087WXS9 549 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 TBC1D3EA0A087X179 549 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 TBC1D3KA0A087X1G2 549 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 TBC1D3FA6NER0 549 aaPredicted RBP17.19■□□□□ 0.34
TRIM13-208ENST00000478111 TBC1D3LB9A6J9 549 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 HSF2BPO75031 334 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 RTN2O75298 545 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 FGFR1OPO95684 399 aaKnown RBP17.19■□□□□ 0.34
TRIM13-208ENST00000478111 TBC1D3HP0C7X1 549 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 ABCB4P21439 1286 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 PON1P27169 355 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 EPHA8P29322 1005 aaPredicted RBP17.19■□□□□ 0.34
TRIM13-208ENST00000478111 USP8P40818 1118 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 BNIP3Q12983 259 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 DNAJC3Q13217 504 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 RABGAP1LQ5R372 815 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 OTUD1Q5VV17 481 aaPredicted RBP17.19■□□□□ 0.34
TRIM13-208ENST00000478111 TBC1D3GQ6DHY5 549 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 TBC1D3CQ6IPX1 549 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 OLFML1Q6UWY5 402 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 FAM183BPQ6ZVS7 135 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 KANSL1Q7Z3B3 1105 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 PDZD3Q86UT5 571 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 SPATS2Q86XZ4 545 aaKnown RBP17.19■□□□□ 0.34
TRIM13-208ENST00000478111 PASD1Q8IV76 773 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 TBC1D3Q8IZP1 549 aaPredicted RBP17.19■□□□□ 0.34
TRIM13-208ENST00000478111 PDCD7Q8N8D1 485 aaKnown RBP17.19■□□□□ 0.34
TRIM13-208ENST00000478111 HNRNPLLQ8WVV9 542 aaKnown RBP17.19■□□□□ 0.34
TRIM13-208ENST00000478111 FAM81BQ96LP2 452 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 RPRD1AQ96P16 312 aaPredicted RBP17.19■□□□□ 0.34
TRIM13-208ENST00000478111 ERVMER34-1Q9H9K5 563 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 GDF3Q9NR23 364 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 RWDD2AQ9UIY3 292 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 VANGL2Q9ULK5 521 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 PPM1HQ9ULR3 514 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 TPX2Q9ULW0 747 aaKnown RBP17.19■□□□□ 0.34
TRIM13-208ENST00000478111 PCDHGA1Q9Y5H4 931 aa17.19■□□□□ 0.34
TRIM13-208ENST00000478111 I6L893 689 aaPredicted RBP17.18■□□□□ 0.34
TRIM13-208ENST00000478111 ENC1O14682 589 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 PLRG1O43660 514 aaKnown RBP17.18■□□□□ 0.34
TRIM13-208ENST00000478111 LDOC1O95751 146 aaPredicted RBP17.18■□□□□ 0.34
TRIM13-208ENST00000478111 ERBB2P04626 1255 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 ITGAVP06756 1048 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 CLCN1P35523 988 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 GGCXP38435 758 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 RXRGP48443 463 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 OXCT1P55809 520 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 CLDN6P56747 220 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 CNTN1Q12860 1018 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 DLG2Q15700 870 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 SOWAHCQ53LP3 525 aaPredicted RBP17.18■□□□□ 0.34
TRIM13-208ENST00000478111 AGBL4Q5VU57 503 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 SFMBT2Q5VUG0 894 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 NAPEPLDQ6IQ20 393 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 GBP6Q6ZN66 633 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 C11orf57Q6ZUT1 292 aaPredicted RBP17.18■□□□□ 0.34
TRIM13-208ENST00000478111 TMPRSS12Q86WS5 348 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 MFSD2AQ8NA29 543 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 C1orf131Q8NDD1 294 aaKnown RBP17.18■□□□□ 0.34
TRIM13-208ENST00000478111 OR8D1Q8WZ84 308 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 TSC1Q92574 1164 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 RNF34Q969K3 372 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 CNDP2Q96KP4 475 aaKnown RBP17.18■□□□□ 0.34
TRIM13-208ENST00000478111 KDM4CQ9H3R0 1056 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 SCUBE2Q9NQ36 999 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 ANLNQ9NQW6 1124 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 TBC1D30Q9Y2I9 924 aa17.18■□□□□ 0.34
TRIM13-208ENST00000478111 GTPBP10A4D1E9 387 aaKnown RBP17.17■□□□□ 0.34
TRIM13-208ENST00000478111 MCF2LO15068 1137 aa17.17■□□□□ 0.34
TRIM13-208ENST00000478111 YKT6O15498 198 aa17.17■□□□□ 0.34
TRIM13-208ENST00000478111 SLC7A4O43246 635 aa17.17■□□□□ 0.34
TRIM13-208ENST00000478111 PAGE1O75459 146 aa17.17■□□□□ 0.34
TRIM13-208ENST00000478111 ACADVLP49748 655 aa17.17■□□□□ 0.34
TRIM13-208ENST00000478111 TAS2R38P59533 333 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms