RNA–Protein interactions for RNA: ENST00000477970.1

PTPRF-212, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 2

Gene PTPRF, Length 3,321 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-212ENST00000477970 AFMIDQ63HM1 303 aa12.49□□□□□ -0.41
PTPRF-212ENST00000477970 MBLAC2Q68D91 279 aa12.49□□□□□ -0.41
PTPRF-212ENST00000477970 PCSK9Q8NBP7 692 aaKnown RBP12.49□□□□□ -0.41
PTPRF-212ENST00000477970 NSL1Q96IY1 281 aa12.49□□□□□ -0.41
PTPRF-212ENST00000477970 WWP1Q9H0M0 922 aa12.49□□□□□ -0.41
PTPRF-212ENST00000477970 MMADHCQ9H3L0 296 aaPredicted RBP12.49□□□□□ -0.41
PTPRF-212ENST00000477970 ZFATQ9P243 1243 aa12.49□□□□□ -0.41
PTPRF-212ENST00000477970 HTTP42858 3142 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 A0A0G2JND7 137 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 TPP1O14773 563 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 EOMESO95936 686 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 MPOP05164 745 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 NEFHP12036 1026 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 PRKAR2AP13861 404 aaKnown RBP12.48□□□□□ -0.41
PTPRF-212ENST00000477970 EZRP15311 586 aaKnown RBP12.48□□□□□ -0.41
PTPRF-212ENST00000477970 LIMK2P53671 638 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 TMPRSS15P98073 1019 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 ZBTB17Q13105 803 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 PRPSAP1Q14558 356 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 OVOS1Q6IE37 1185 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 NAPEPLDQ6IQ20 393 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 CRLF3Q8IUI8 442 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 TP53INP2Q8IXH6 220 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 OR10T2Q8NGX3 314 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 OR6Y1Q8NGX8 325 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 ADAM32Q8TC27 787 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 TBC1D10AQ9BXI6 508 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 SLC13A1Q9BZW2 595 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 ALG13Q9NP73 1137 aaKnown RBP12.48□□□□□ -0.41
PTPRF-212ENST00000477970 TMLHEQ9NVH6 421 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 DCTN4Q9UJW0 460 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 RPS6KL1Q9Y6S9 549 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 B3GAT3O94766 335 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 PROCP04070 461 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 MYL2P10916 166 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 BDNFP23560 247 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 GRK2P25098 689 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 SPRP35270 261 aaPredicted RBP12.48□□□□□ -0.41
PTPRF-212ENST00000477970 SERPINB8P50452 374 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 CES4AQ5XG92 561 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 OR52K1Q8NGK4 314 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 FCRL3Q96P31 734 aaPredicted RBP12.48□□□□□ -0.41
PTPRF-212ENST00000477970 MRM3Q9HC36 420 aaKnown RBP12.48□□□□□ -0.41
PTPRF-212ENST00000477970 RGS18Q9NS28 235 aa12.48□□□□□ -0.41
PTPRF-212ENST00000477970 HBS1LQ9Y450 684 aaKnown RBP12.48□□□□□ -0.41
PTPRF-212ENST00000477970 KCNK1O00180 336 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 ALOX15P16050 662 aaPredicted RBP12.47□□□□□ -0.41
PTPRF-212ENST00000477970 EPHB2P29323 1055 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 POLD2P49005 469 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 TRIM32Q13049 653 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 STX3Q13277 289 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 KCNA10Q16322 511 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 ANKRD20A4Q4UJ75 823 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 FAM182AQ5T1J6 154 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 AGAP11Q8TF27 550 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 PTCD2Q8WV60 388 aaKnown RBP12.47□□□□□ -0.41
PTPRF-212ENST00000477970 FCRL5Q96RD9 977 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 IL12RB2Q99665 862 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 BTBD10Q9BSF8 475 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 KIFC1Q9BW19 673 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 RNF208Q9H0X6 261 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 AAR2Q9Y312 384 aaKnown RBP12.47□□□□□ -0.41
PTPRF-212ENST00000477970 CAPN14A8MX76 684 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 PRKCGP05129 697 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 FGF3P11487 239 aaPredicted RBP12.47□□□□□ -0.41
PTPRF-212ENST00000477970 SERPINB3P29508 390 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 DSC1Q08554 894 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 CDH17Q12864 832 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 TEDDM1Q5T9Z0 273 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 CLEC14AQ86T13 490 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 LRRTM3Q86VH5 581 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 UNC5BQ8IZJ1 945 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 ENDOVQ8N8Q3 282 aaKnown RBP12.47□□□□□ -0.41
PTPRF-212ENST00000477970 STON2Q8WXE9 905 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 ADAM2Q99965 735 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 MECRQ9BV79 373 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 CATSPERBQ9H7T0 1116 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 CBX6O95503 412 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 BRCC3P46736 316 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 GTF2A1P52655 376 aaPredicted RBP12.47□□□□□ -0.41
PTPRF-212ENST00000477970 CRADDP78560 199 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 HSF5Q4G112 596 aaPredicted RBP12.47□□□□□ -0.41
PTPRF-212ENST00000477970 FASTKD1Q53R41 847 aaKnown RBP12.47□□□□□ -0.41
PTPRF-212ENST00000477970 LHX8Q68G74 356 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 MSANTD2Q6P1R3 559 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 ARHGAP12Q8IWW6 846 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 EDEM1Q92611 657 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 FUBP3Q96I24 572 aaKnown RBP eCLIP12.47□□□□□ -0.41
PTPRF-212ENST00000477970 C1orf74Q96LT6 269 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 RHOBTB2Q9BYZ6 727 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 TXNDC16Q9P2K2 825 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 PSAT1Q9Y617 370 aa12.47□□□□□ -0.41
PTPRF-212ENST00000477970 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.46□□□□□ -0.41
PTPRF-212ENST00000477970 ARHGAP42A6NI28 874 aa12.46□□□□□ -0.41
PTPRF-212ENST00000477970 TIMM44O43615 452 aa12.46□□□□□ -0.41
PTPRF-212ENST00000477970 H2AFYO75367 372 aaKnown RBP12.46□□□□□ -0.41
PTPRF-212ENST00000477970 OAZ2O95190 189 aa12.46□□□□□ -0.41
PTPRF-212ENST00000477970 POMCP01189 267 aa12.46□□□□□ -0.41
PTPRF-212ENST00000477970 SERPINE1P05121 402 aa12.46□□□□□ -0.41
PTPRF-212ENST00000477970 SRGAP2BP0DMP2 458 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms