RNA–Protein interactions for RNA: ENST00000476772.5

VEGFA-211, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 1,683 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-211ENST00000476772 ARHGAP42A6NI28 874 aa29.52■■■□□ 2.32
VEGFA-211ENST00000476772 SOBPA7XYQ1 873 aa29.52■■■□□ 2.32
VEGFA-211ENST00000476772 GAD2Q05329 585 aa29.52■■■□□ 2.32
VEGFA-211ENST00000476772 POTEHQ6S545 545 aa29.52■■■□□ 2.32
VEGFA-211ENST00000476772 BBS7Q8IWZ6 715 aa29.52■■■□□ 2.32
VEGFA-211ENST00000476772 ITFG1Q8TB96 612 aa29.52■■■□□ 2.32
VEGFA-211ENST00000476772 USP13Q92995 863 aaPredicted RBP29.52■■■□□ 2.32
VEGFA-211ENST00000476772 NSUN3Q9H649 340 aaKnown RBP29.52■■■□□ 2.32
VEGFA-211ENST00000476772 IPO11Q9UI26 975 aaKnown RBP29.52■■■□□ 2.32
VEGFA-211ENST00000476772 HPCAL4Q9UM19 191 aa29.52■■■□□ 2.32
VEGFA-211ENST00000476772 ZNF510Q9Y2H8 683 aa29.52■■■□□ 2.32
VEGFA-211ENST00000476772 C2orf16Q68DN1 1984 aa29.52■■■□□ 2.32
VEGFA-211ENST00000476772 A0A1B0GVM2 712 aa29.51■■■□□ 2.31
VEGFA-211ENST00000476772 TCAF2A6NFQ2 919 aa29.51■■■□□ 2.31
VEGFA-211ENST00000476772 GOLGA8MH3BSY2 632 aa29.51■■■□□ 2.31
VEGFA-211ENST00000476772 GFRA2O00451 464 aa29.51■■■□□ 2.31
VEGFA-211ENST00000476772 CHADO15335 359 aa29.51■■■□□ 2.31
VEGFA-211ENST00000476772 CLDN11O75508 207 aa29.51■■■□□ 2.31
VEGFA-211ENST00000476772 GLP2RO95838 553 aa29.51■■■□□ 2.31
VEGFA-211ENST00000476772 HYAL1Q12794 435 aa29.51■■■□□ 2.31
VEGFA-211ENST00000476772 POLD3Q15054 466 aaPredicted RBP29.51■■■□□ 2.31
VEGFA-211ENST00000476772 TCEAL5Q5H9L2 206 aa29.51■■■□□ 2.31
VEGFA-211ENST00000476772 CHST9Q7L1S5 443 aa29.51■■■□□ 2.31
VEGFA-211ENST00000476772 PID1Q7Z2X4 250 aa29.51■■■□□ 2.31
VEGFA-211ENST00000476772 ZSCAN18Q8TBC5 510 aaPredicted RBP29.51■■■□□ 2.31
VEGFA-211ENST00000476772 ZSWIM3Q96MP5 696 aa29.51■■■□□ 2.31
VEGFA-211ENST00000476772 F5H423 210 aaPredicted RBP29.5■■■□□ 2.31
VEGFA-211ENST00000476772 PRAMEF12O95522 483 aa29.5■■■□□ 2.31
VEGFA-211ENST00000476772 MYO9BQ13459 2157 aa29.5■■■□□ 2.31
VEGFA-211ENST00000476772 UAP1Q16222 522 aaPredicted RBP29.5■■■□□ 2.31
VEGFA-211ENST00000476772 PARP15Q460N3 678 aa29.5■■■□□ 2.31
VEGFA-211ENST00000476772 RARS2Q5T160 578 aaKnown RBP29.5■■■□□ 2.31
VEGFA-211ENST00000476772 TTC39BQ5VTQ0 682 aaPredicted RBP29.5■■■□□ 2.31
VEGFA-211ENST00000476772 TIGD7Q6NT04 549 aaPredicted RBP29.5■■■□□ 2.31
VEGFA-211ENST00000476772 RIN3Q8TB24 985 aa29.5■■■□□ 2.31
VEGFA-211ENST00000476772 FOXP3Q9BZS1 431 aa29.5■■■□□ 2.31
VEGFA-211ENST00000476772 TDP1Q9NUW8 608 aa29.5■■■□□ 2.31
VEGFA-211ENST00000476772 MATN3O15232 486 aa29.5■■■□□ 2.31
VEGFA-211ENST00000476772 LINC01565O15544 149 aa29.5■■■□□ 2.31
VEGFA-211ENST00000476772 JCHAINP01591 159 aa29.5■■■□□ 2.31
VEGFA-211ENST00000476772 YBEYP58557 167 aaPredicted RBP29.5■■■□□ 2.31
VEGFA-211ENST00000476772 SLMAPQ14BN4 828 aa29.5■■■□□ 2.31
VEGFA-211ENST00000476772 TEX44Q53QW1 395 aa29.5■■■□□ 2.31
VEGFA-211ENST00000476772 OR52K2Q8NGK3 314 aa29.5■■■□□ 2.31
VEGFA-211ENST00000476772 USP33Q8TEY7 942 aa29.5■■■□□ 2.31
VEGFA-211ENST00000476772 AGAP3Q96P47 875 aa29.5■■■□□ 2.31
VEGFA-211ENST00000476772 VAT1Q99536 393 aa29.5■■■□□ 2.31
VEGFA-211ENST00000476772 TSPYL1Q9H0U9 437 aa29.5■■■□□ 2.31
VEGFA-211ENST00000476772 ZNF576Q9H609 170 aa29.5■■■□□ 2.31
VEGFA-211ENST00000476772 SMAPO00193 183 aa29.49■■■□□ 2.31
VEGFA-211ENST00000476772 TBL1XO60907 577 aa29.49■■■□□ 2.31
VEGFA-211ENST00000476772 CCNB1P14635 433 aa29.49■■■□□ 2.31
VEGFA-211ENST00000476772 PSMB4P28070 264 aa29.49■■■□□ 2.31
VEGFA-211ENST00000476772 ACVRL1P37023 503 aa29.49■■■□□ 2.31
VEGFA-211ENST00000476772 HSD17B3P37058 310 aa29.49■■■□□ 2.31
VEGFA-211ENST00000476772 FDFT1P37268 417 aa29.49■■■□□ 2.31
VEGFA-211ENST00000476772 PMS2P54278 862 aa29.49■■■□□ 2.31
VEGFA-211ENST00000476772 IFI35P80217 286 aaPredicted RBP29.49■■■□□ 2.31
VEGFA-211ENST00000476772 SEMA5AQ13591 1074 aa29.49■■■□□ 2.31
VEGFA-211ENST00000476772 CBX2Q14781 532 aaPredicted RBP29.49■■■□□ 2.31
VEGFA-211ENST00000476772 ZNF354CQ86Y25 554 aa29.49■■■□□ 2.31
VEGFA-211ENST00000476772 HJURPQ8NCD3 748 aaPredicted RBP29.49■■■□□ 2.31
VEGFA-211ENST00000476772 APOL5Q9BWW9 433 aa29.49■■■□□ 2.31
VEGFA-211ENST00000476772 VIPAS39Q9H9C1 493 aa29.49■■■□□ 2.31
VEGFA-211ENST00000476772 IGSF9Q9P2J2 1179 aa29.49■■■□□ 2.31
VEGFA-211ENST00000476772 ZMYM5Q9UJ78 669 aa29.49■■■□□ 2.31
VEGFA-211ENST00000476772 TRHDEQ9UKU6 1024 aa29.49■■■□□ 2.31
VEGFA-211ENST00000476772 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP29.48■■■□□ 2.31
VEGFA-211ENST00000476772 ZBTB24O43167 697 aaPredicted RBP29.48■■■□□ 2.31
VEGFA-211ENST00000476772 MAGEA6P43360 314 aa29.48■■■□□ 2.31
VEGFA-211ENST00000476772 ZNF177Q13360 481 aaPredicted RBP29.48■■■□□ 2.31
VEGFA-211ENST00000476772 CPXM2Q8N436 756 aa29.48■■■□□ 2.31
VEGFA-211ENST00000476772 UBLCP1Q8WVY7 318 aaPredicted RBP29.48■■■□□ 2.31
VEGFA-211ENST00000476772 TMA16Q96EY4 203 aaKnown RBP29.48■■■□□ 2.31
VEGFA-211ENST00000476772 MYO18AQ92614 2054 aaKnown RBP29.48■■■□□ 2.31
VEGFA-211ENST00000476772 CHD5Q8TDI0 1954 aa29.48■■■□□ 2.31
VEGFA-211ENST00000476772 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP29.47■■■□□ 2.31
VEGFA-211ENST00000476772 E2F8A0AVK6 867 aa29.47■■■□□ 2.31
VEGFA-211ENST00000476772 J3KR12 359 aa29.47■■■□□ 2.31
VEGFA-211ENST00000476772 APRTP07741 180 aa29.47■■■□□ 2.31
VEGFA-211ENST00000476772 CD68P34810 354 aaPredicted RBP29.47■■■□□ 2.31
VEGFA-211ENST00000476772 SERINC3Q13530 473 aa29.47■■■□□ 2.31
VEGFA-211ENST00000476772 PARP6Q2NL67 630 aa29.47■■■□□ 2.31
VEGFA-211ENST00000476772 C6orf118Q5T5N4 469 aa29.47■■■□□ 2.31
VEGFA-211ENST00000476772 TDRD5Q8NAT2 981 aaKnown RBP29.47■■■□□ 2.31
VEGFA-211ENST00000476772 ARHGEF2Q92974 986 aaKnown RBP29.47■■■□□ 2.31
VEGFA-211ENST00000476772 EXOC4Q96A65 974 aa29.47■■■□□ 2.31
VEGFA-211ENST00000476772 ZNF419Q96HQ0 510 aaPredicted RBP29.47■■■□□ 2.31
VEGFA-211ENST00000476772 TEKT5Q96M29 485 aa29.47■■■□□ 2.31
VEGFA-211ENST00000476772 RBM15Q96T37 977 aaKnown RBP eCLIP29.47■■■□□ 2.311e-8■■□□□ 11.7
VEGFA-211ENST00000476772 IL12RB2Q99665 862 aa29.47■■■□□ 2.31
VEGFA-211ENST00000476772 SP110Q9HB58 689 aa29.47■■■□□ 2.31
VEGFA-211ENST00000476772 A0A0D9SEW6 157 aa29.47■■■□□ 2.31
VEGFA-211ENST00000476772 TYW5A2RUC4 315 aaKnown RBP29.47■■■□□ 2.31
VEGFA-211ENST00000476772 RHOCP08134 193 aa29.47■■■□□ 2.31
VEGFA-211ENST00000476772 GNA12Q03113 381 aa29.47■■■□□ 2.31
VEGFA-211ENST00000476772 TMEM184AQ6ZMB5 413 aa29.47■■■□□ 2.31
VEGFA-211ENST00000476772 EFHBQ8N7U6 833 aa29.47■■■□□ 2.31
VEGFA-211ENST00000476772 CNTD1Q8N815 330 aa29.47■■■□□ 2.31
VEGFA-211ENST00000476772 MAML1Q92585 1016 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms