RNA–Protein interactions for RNA: ENST00000476625.5

HDAC6-219, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 967 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-219ENST00000476625 CRTC1Q6UUV9 634 aa12.34□□□□□ -0.43
HDAC6-219ENST00000476625 CCAR2Q8N163 923 aaKnown RBP12.34□□□□□ -0.43
HDAC6-219ENST00000476625 PPM1KQ8N3J5 372 aa12.34□□□□□ -0.43
HDAC6-219ENST00000476625 MFSD2AQ8NA29 543 aa12.34□□□□□ -0.43
HDAC6-219ENST00000476625 BAP1Q92560 729 aa12.34□□□□□ -0.43
HDAC6-219ENST00000476625 CCDC47Q96A33 483 aaKnown RBP12.34□□□□□ -0.43
HDAC6-219ENST00000476625 ARRDC3Q96B67 414 aa12.34□□□□□ -0.43
HDAC6-219ENST00000476625 LGMNQ99538 433 aa12.34□□□□□ -0.43
HDAC6-219ENST00000476625 SNX10Q9Y5X0 201 aa12.34□□□□□ -0.43
HDAC6-219ENST00000476625 U3KQA8 63 aa12.34□□□□□ -0.43
HDAC6-219ENST00000476625 TYW5A2RUC4 315 aaKnown RBP12.33□□□□□ -0.44
HDAC6-219ENST00000476625 K7ERQ8 282 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 TK2O00142 265 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 SLC31A1O15431 190 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 STX10O60499 249 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 RNGTTO60942 597 aaKnown RBP12.33□□□□□ -0.44
HDAC6-219ENST00000476625 ZNF202O95125 648 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 HSP90AA1P07900 732 aaKnown RBP12.33□□□□□ -0.44
HDAC6-219ENST00000476625 DGKAP23743 735 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 FMO5P49326 533 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 GABREP78334 506 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 DAB2P98082 770 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 CNGA2Q16280 664 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 ACCSLQ4AC99 568 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 OR6B2Q6IFH4 312 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 PRPF39Q86UA1 669 aaKnown RBP12.33□□□□□ -0.44
HDAC6-219ENST00000476625 SLC22A18ASQ8N1D0 253 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 OR13H1Q8NG92 308 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 LMO3Q8TAP4 145 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 RFFLQ8WZ73 363 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 SNX21Q969T3 373 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 AZIN2Q96A70 460 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 FAM131CQ96AQ9 280 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 SKA1Q96BD8 255 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 ALG14Q96F25 216 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 FAXDC2Q96IV6 333 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 KREMEN1Q96MU8 473 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 SERPINB11Q96P15 392 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 PRMT1Q99873 361 aaKnown RBP12.33□□□□□ -0.44
HDAC6-219ENST00000476625 CALN1Q9BXU9 219 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 ERVMER34-1Q9H9K5 563 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 KALRNO60229 2985 aa12.33□□□□□ -0.44
HDAC6-219ENST00000476625 KIF26BQ2KJY2 2108 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 HELZ2Q9BYK8 2649 aaKnown RBP12.32□□□□□ -0.44
HDAC6-219ENST00000476625 TEX51A0A1B0GUA7 166 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 A0A1W2PQU0 124 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 E5RJQ4 531 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 YKT6O15498 198 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 USP12O75317 370 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 CSO75390 466 aaKnown RBP12.32□□□□□ -0.44
HDAC6-219ENST00000476625 GRAP2O75791 330 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 MOCS3O95396 460 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 TRUB2O95900 331 aaKnown RBP12.32□□□□□ -0.44
HDAC6-219ENST00000476625 MT-CO1P00395 513 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 IGLV3-25P01717 112 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 PAEPP09466 180 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 THEGLP0DJG4 465 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 CD44P16070 742 aaKnown RBP12.32□□□□□ -0.44
HDAC6-219ENST00000476625 ACTN2P35609 894 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 GPD2P43304 727 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 YWHAEP62258 255 aaKnown RBP12.32□□□□□ -0.44
HDAC6-219ENST00000476625 APBA1Q02410 837 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 ELAVL3Q14576 367 aaKnown RBP12.32□□□□□ -0.44
HDAC6-219ENST00000476625 STAT4Q14765 748 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 TAF1BQ53T94 588 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-219ENST00000476625 SLC45A4Q5BKX6 768 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 PIP5KL1Q5T9C9 394 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 CDCP2Q5VXM1 449 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 KIAA1614Q5VZ46 1190 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 SEL1L3Q68CR1 1132 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 ATL3Q6DD88 541 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 C14orf80Q86SX3 495 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 HSCBQ8IWL3 235 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 KDM1BQ8NB78 822 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 NT5C1BQ96P26 610 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 ZFR2Q9UPR6 939 aaKnown RBP12.32□□□□□ -0.44
HDAC6-219ENST00000476625 ATMQ13315 3056 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 ASH1LQ9NR48 2969 aaKnown RBP12.32□□□□□ -0.44
HDAC6-219ENST00000476625 MGAQ8IWI9 3026 aa12.32□□□□□ -0.44
HDAC6-219ENST00000476625 F5H5T6 163 aa12.31□□□□□ -0.44
HDAC6-219ENST00000476625 SLC16A3O15427 465 aaKnown RBP12.31□□□□□ -0.44
HDAC6-219ENST00000476625 OPA1O60313 960 aa12.31□□□□□ -0.44
HDAC6-219ENST00000476625 SNAP91O60641 907 aa12.31□□□□□ -0.44
HDAC6-219ENST00000476625 APOEP02649 317 aa12.31□□□□□ -0.44
HDAC6-219ENST00000476625 TBXAS1P24557 533 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-219ENST00000476625 KCNMA1Q12791 1236 aa12.31□□□□□ -0.44
HDAC6-219ENST00000476625 SFSWAPQ12872 951 aaKnown RBP12.31□□□□□ -0.44
HDAC6-219ENST00000476625 DLG2Q15700 870 aa12.31□□□□□ -0.44
HDAC6-219ENST00000476625 C3orf38Q5JPI3 329 aa12.31□□□□□ -0.44
HDAC6-219ENST00000476625 TPRG1LQ5T0D9 272 aa12.31□□□□□ -0.44
HDAC6-219ENST00000476625 FBXL22Q6P050 247 aa12.31□□□□□ -0.44
HDAC6-219ENST00000476625 GJB7Q6PEY0 223 aa12.31□□□□□ -0.44
HDAC6-219ENST00000476625 GCNT7Q6ZNI0 430 aa12.31□□□□□ -0.44
HDAC6-219ENST00000476625 TRIM69Q86WT6 500 aa12.31□□□□□ -0.44
HDAC6-219ENST00000476625 CCDC117Q8IWD4 279 aaPredicted RBP12.31□□□□□ -0.44
HDAC6-219ENST00000476625 TMEM145Q8NBT3 493 aa12.31□□□□□ -0.44
HDAC6-219ENST00000476625 CHST14Q8NCH0 376 aa12.31□□□□□ -0.44
HDAC6-219ENST00000476625 OR4C6Q8NH72 309 aa12.31□□□□□ -0.44
HDAC6-219ENST00000476625 OR8D1Q8WZ84 308 aa12.31□□□□□ -0.44
HDAC6-219ENST00000476625 KLHDC7BQ96G42 594 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms