RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 COPB1P53618 953 aaKnown RBP11.1□□□□□ -0.63
SEC13-214ENST00000476597 SIM1P81133 766 aaPredicted RBP11.1□□□□□ -0.63
SEC13-214ENST00000476597 CDR2Q01850 454 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 ELAVL3Q14576 367 aaKnown RBP11.1□□□□□ -0.63
SEC13-214ENST00000476597 TRIP6Q15654 476 aaKnown RBP11.1□□□□□ -0.63
SEC13-214ENST00000476597 DLG2Q15700 870 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 KIF19Q2TAC6 998 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 FKBP15Q5T1M5 1219 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 ARTNQ5T4W7 220 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 ACBD5Q5T8D3 534 aaPredicted RBP11.1□□□□□ -0.63
SEC13-214ENST00000476597 KIAA0895LQ68EN5 471 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 TRNP1Q6NT89 227 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 AADATQ8N5Z0 425 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 MSANTD4Q8NCY6 345 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 OR2T34Q8NGX1 318 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 SNX19Q92543 992 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 CAMK1GQ96NX5 476 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 OMDQ99983 421 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 FAM207AQ9NSI2 230 aaPredicted RBP11.1□□□□□ -0.63
SEC13-214ENST00000476597 SIK3Q9Y2K2 1263 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 PAXBP1Q9Y5B6 917 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 SNX10Q9Y5X0 201 aa11.1□□□□□ -0.63
SEC13-214ENST00000476597 PCDH15Q96QU1 1955 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 MUC22E2RYF6 1773 aaPredicted RBP11.09□□□□□ -0.63
SEC13-214ENST00000476597 IGLV3-10A0A075B6K4 115 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 A0A1W2PPC4 97 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 FAM170AA1A519 330 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 FAM47DPA6NHR8 397 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 LRRC72A6NJI9 287 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 GOLGA6L22H0YM25 854 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 GOLGA8SH3BPF8 625 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 CBFA2T3O75081 653 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 TRIM16O95361 564 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 CER1O95813 267 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 IL1BP01584 269 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 ZNF18P17022 549 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 SPINK2P20155 84 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 MMP8P22894 467 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 SOX5P35711 763 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 STAT1P42224 750 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 PSMD8P48556 350 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 RACK1P63244 317 aaKnown RBP11.09□□□□□ -0.63
SEC13-214ENST00000476597 KRT83P78385 493 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 FMO1Q01740 532 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 MYL5Q02045 173 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 NCAPHQ15003 741 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 SYCP1Q15431 976 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 TEAD4Q15561 434 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 ALFQ53S48 1182 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 NAA35Q5VZE5 725 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 NCEH1Q6PIU2 408 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 LRRC31Q6UY01 552 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 APTXQ7Z2E3 356 aaKnown RBP11.09□□□□□ -0.63
SEC13-214ENST00000476597 SETD3Q86TU7 594 aaPredicted RBP11.09□□□□□ -0.63
SEC13-214ENST00000476597 NAXDQ8IW45 347 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 SLC20A1Q8WUM9 679 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 FAM131CQ96AQ9 280 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 CFAP57Q96MR6 1250 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 SPAG5Q96R06 1193 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 HAPLN3Q96S86 360 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 SCNM1Q9BWG6 230 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 EBF2Q9HAK2 575 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 NLRC4Q9NPP4 1024 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 TMPRSS4Q9NRS4 437 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 TM7SF3Q9NS93 570 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 SLC25A13Q9UJS0 675 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 VPS28Q9UK41 221 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 SARDHQ9UL12 918 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 PPM1HQ9ULR3 514 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 ANKRD6Q9Y2G4 727 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 FNDC3AQ9Y2H6 1198 aaKnown RBP11.09□□□□□ -0.63
SEC13-214ENST00000476597 PCDHB9Q9Y5E1 797 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 PCDHGB2Q9Y5G2 931 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 SNX11Q9Y5W9 270 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 PCNX2A6NKB5 2137 aa11.09□□□□□ -0.63
SEC13-214ENST00000476597 WDFY3Q8IZQ1 3526 aa11.08□□□□□ -0.64
SEC13-214ENST00000476597 FAM221BA6H8Z2 402 aa11.08□□□□□ -0.64
SEC13-214ENST00000476597 E9PAM4 449 aa11.08□□□□□ -0.64
SEC13-214ENST00000476597 MCF2LO15068 1137 aa11.08□□□□□ -0.64
SEC13-214ENST00000476597 MT-CO1P00395 513 aa11.08□□□□□ -0.64
SEC13-214ENST00000476597 PROS1P07225 676 aa11.08□□□□□ -0.64
SEC13-214ENST00000476597 SRCP12931 536 aa11.08□□□□□ -0.64
SEC13-214ENST00000476597 UNGP13051 313 aaPredicted RBP11.08□□□□□ -0.64
SEC13-214ENST00000476597 CDK11BP21127 795 aaKnown RBP11.08□□□□□ -0.64
SEC13-214ENST00000476597 RDXP35241 583 aaKnown RBP11.08□□□□□ -0.64
SEC13-214ENST00000476597 DRD3P35462 400 aa11.08□□□□□ -0.64
SEC13-214ENST00000476597 CTSKP43235 329 aa11.08□□□□□ -0.64
SEC13-214ENST00000476597 CCR5P51681 352 aa11.08□□□□□ -0.64
SEC13-214ENST00000476597 SUZ12Q15022 739 aaKnown RBP11.08□□□□□ -0.64
SEC13-214ENST00000476597 STX1AQ16623 288 aa11.08□□□□□ -0.64
SEC13-214ENST00000476597 ST3GAL2Q16842 350 aa11.08□□□□□ -0.64
SEC13-214ENST00000476597 CCDC14Q49A88 953 aa11.08□□□□□ -0.64
SEC13-214ENST00000476597 ACCSLQ4AC99 568 aa11.08□□□□□ -0.64
SEC13-214ENST00000476597 KCNT1Q5JUK3 1230 aa11.08□□□□□ -0.64
SEC13-214ENST00000476597 LRSAM1Q6UWE0 723 aa11.08□□□□□ -0.64
SEC13-214ENST00000476597 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP11.08□□□□□ -0.64
SEC13-214ENST00000476597 DSG4Q86SJ6 1040 aa11.08□□□□□ -0.64
SEC13-214ENST00000476597 SH2D3CQ8N5H7 860 aa11.08□□□□□ -0.64
SEC13-214ENST00000476597 ANKRD20A12PQ8NF67 263 aa11.08□□□□□ -0.64
SEC13-214ENST00000476597 NEK11Q8NG66 645 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms