RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 CDC25AP30304 524 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 SERPINB1P30740 379 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 RFC4P35249 363 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 RAD52P43351 418 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 STX17P56962 302 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 MLLT1Q03111 559 aaPredicted RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 PTH1RQ03431 593 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 SSRP1Q08945 709 aaKnown RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 DMC1Q14565 340 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 ZNF846Q147U1 533 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 TLR1Q15399 786 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 AADACL4Q5VUY2 407 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 GARNL3Q5VVW2 1013 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 SLC6A19Q695T7 634 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 ZNF425Q6IV72 752 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 WDR59Q6PJI9 974 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 PAOXQ6QHF9 649 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 XKR5Q6UX68 686 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 PRR23BQ6ZRT6 265 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 RIPOR1Q6ZS17 1223 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 NIPA1Q7RTP0 329 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 HDDC2Q7Z4H3 204 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 CLNKQ7Z7G1 428 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 ZER1Q7Z7L7 766 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 ADCK1Q86TW2 530 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 ZNF589Q86UQ0 364 aaPredicted RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 NLRX1Q86UT6 975 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 ZSWIM9Q86XI8 627 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 HERC6Q8IVU3 1022 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 SULF1Q8IWU6 871 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 KLHL7Q8IXQ5 586 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 TAGAPQ8N103 731 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 XXYLT1Q8NBI6 393 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 LEMD2Q8NC56 503 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 PDPRQ8NCN5 879 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 TSPAN14Q8NG11 270 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 SEC14L1Q92503 715 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 WASF1Q92558 559 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 NINJ1Q92982 152 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 NKD2Q969F2 451 aaPredicted RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 RAD51AP1Q96B01 352 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 PHF21AQ96BD5 680 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 SHDQ96IW2 340 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 ZNF560Q96MR9 790 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 FMO2Q99518 471 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 CLSTN3Q9BQT9 956 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 DCUN1D5Q9BTE7 237 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 ROPN1BQ9BZX4 212 aaPredicted RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 C6orf62Q9GZU0 229 aaPredicted RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 DHX33Q9H6R0 707 aaKnown RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 NOL6Q9H6R4 1146 aaKnown RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 NHEJ1Q9H9Q4 299 aaPredicted RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 ROPN1Q9HAT0 212 aaPredicted RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 RC3H2Q9HBD1 1191 aaKnown RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 LRRC4CQ9HCJ2 640 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 TRIM39Q9HCM9 518 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 IL1RAPL2Q9NP60 686 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 PRDM11Q9NQV5 511 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 PRDM9Q9NQV7 894 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 ANKEF1Q9NU02 776 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 LRWD1Q9UFC0 647 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 TRPS1Q9UHF7 1281 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 TRHDEQ9UKU6 1024 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 PPM1HQ9ULR3 514 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 PPT2Q9UMR5 302 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 TESMINQ9Y4I5 508 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 TRAF6Q9Y4K3 522 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 RBM8AQ9Y5S9 174 aaKnown RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 CSNK1G3Q9Y6M4 447 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 DUSP10Q9Y6W6 482 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 MYH4Q9Y623 1939 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 KIF13AQ9H1H9 1805 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 RTL9Q8NET4 1388 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 ASXL2Q76L83 1435 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 MYH10P35580 1976 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 CAMSAP1Q5T5Y3 1602 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 SYNJ2BP-COX16A0A087WUM0 186 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 TRAV20A0A0B4J274 112 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 ABHD14A-ACY1A0A1B0GW23 586 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 A0A1W2PQC6 194 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 TTC26A0AVF1 554 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 RAB19A4D1S5 217 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 PRR23AA6NEV1 266 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 HMX3A6NHT5 357 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 DBX1A6NMT0 343 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 B4E1Z4 1266 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 I3L4J1 428 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 PJA2O43164 708 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 DNAJA2O60884 412 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 PTCD1O75127 700 aaKnown RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 PSIP1O75475 530 aaKnown RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 CSDE1O75534 798 aaKnown RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 VNN1O95497 513 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 NADKO95544 446 aaPredicted RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 CFBP00751 764 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 GH2P01242 217 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 APOC1P02654 83 aa4.23□□□□□ -1.73
CD55-208ENST00000476590 LTA4HP09960 611 aaKnown RBP4.23□□□□□ -1.73
CD55-208ENST00000476590 SRGAP2BP0DMP2 458 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms