RNA–Protein interactions for RNA: ENST00000476169.1

VPS13D-207, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 3

Gene VPS13D, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-207ENST00000476169 CTDSP1Q9GZU7 261 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 C2orf40Q9H1Z8 148 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 TTC12Q9H892 705 aaPredicted RBP4.46□□□□□ -1.7
VPS13D-207ENST00000476169 TBCCD1Q9NVR7 557 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 PARPBPQ9NWS1 579 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 HCN3Q9P1Z3 774 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 ST6GALNAC2Q9UJ37 374 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 ODF2LQ9ULJ1 636 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 TMCC3Q9ULS5 477 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 SLC12A4Q9UP95 1085 aa4.46□□□□□ -1.7
VPS13D-207ENST00000476169 UBE2J1Q9Y385 318 aaPredicted RBP4.46□□□□□ -1.7
VPS13D-207ENST00000476169 GPRASP1Q5JY77 1395 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 LOC105369274A0A096LPK9 316 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 LOC102723532A0A0G2JNH3 316 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 GOLGA6L10A0A0M3HER8 536 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 C16orf96A6NNT2 1141 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 EIF3CLB5ME19 914 aaKnown RBP4.45□□□□□ -1.7
VPS13D-207ENST00000476169 GCOM1H8Y6P7 765 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-207ENST00000476169 CTDSP2O14595 271 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 BCAT2O15382 392 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-207ENST00000476169 SLC7A4O43246 635 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 HTATSF1O43719 755 aaKnown RBP4.45□□□□□ -1.7
VPS13D-207ENST00000476169 DIAPH2O60879 1101 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 SPDEFO95238 335 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 URODP06132 367 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 RHOP08100 348 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 PSMA3P25788 255 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 TTKP33981 857 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 LIPAP38571 399 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 NRIP1P48552 1158 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 ZNF41P51814 821 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-207ENST00000476169 ZNF131P52739 623 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 DGKQP52824 942 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 RRP1P56182 461 aaKnown RBP4.45□□□□□ -1.7
VPS13D-207ENST00000476169 BPIFB3P59826 476 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 PRAMEP78395 509 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 GUCY1B3Q02153 619 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 AP1B1Q10567 949 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 TFCP2Q12800 502 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 CAMK2DQ13557 499 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 TNFAIP1Q13829 316 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 SF3B3Q15393 1217 aaKnown RBP4.45□□□□□ -1.7
VPS13D-207ENST00000476169 TCP11X2Q5H9J9 407 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 RAB41Q5JT25 222 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 ZNF362Q5T0B9 420 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-207ENST00000476169 TREML2Q5T2D2 321 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 UBAP2Q5T6F2 1119 aaKnown RBP4.45□□□□□ -1.7
VPS13D-207ENST00000476169 ERMARDQ5T6L9 678 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 ZNF618Q5T7W0 954 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 ISM2Q6H9L7 571 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 KRT80Q6KB66 452 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 CDC73Q6P1J9 531 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 DCLRE1AQ6PJP8 1040 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 SLC30A9Q6PML9 568 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 PET117Q6UWS5 81 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 KIAA1324Q6UXG2 1013 aaKnown RBP4.45□□□□□ -1.7
VPS13D-207ENST00000476169 DPY19L3Q6ZPD9 716 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 DNAAF5Q86Y56 855 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 ERC1Q8IUD2 1116 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 LINC00346Q8IVM7 164 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 SCN4BQ8IWT1 228 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 UNC45BQ8IWX7 931 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 LMNTD2Q8IXW0 634 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 OR4N4Q8N0Y3 316 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 POC5Q8NA72 575 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 POGLUT1Q8NBL1 392 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 SPC24Q8NBT2 197 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 CHST13Q8NET6 341 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 Q8NFD4 153 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 GPR150Q8NGU9 434 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 GSDMBQ8TAX9 411 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 GDAP1Q8TB36 358 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 MYCBPAPQ8TBZ2 947 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 XAGE5Q8WWM1 108 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 OVCA2Q8WZ82 227 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 SECISBP2LQ93073 1101 aaKnown RBP4.45□□□□□ -1.7
VPS13D-207ENST00000476169 RMDN1Q96DB5 314 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 SAT2Q96F10 170 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-207ENST00000476169 PGAP3Q96FM1 320 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-207ENST00000476169 VPS50Q96JG6 964 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 KLHL15Q96M94 604 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 ABHD1Q96SE0 405 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 CITED2Q99967 270 aaPredicted RBP4.45□□□□□ -1.7
VPS13D-207ENST00000476169 PAAF1Q9BRP4 392 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 BDH2Q9BUT1 245 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 THAP1Q9NVV9 213 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 COQ3Q9NZJ6 369 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 MPP6Q9NZW5 540 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 TESQ9UGI8 421 aaKnown RBP4.45□□□□□ -1.7
VPS13D-207ENST00000476169 OSGIN2Q9Y236 505 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 PCDHB2Q9Y5E7 798 aa4.45□□□□□ -1.7
VPS13D-207ENST00000476169 ZCCHC6Q5VYS8 1495 aaKnown RBP4.44□□□□□ -1.7
VPS13D-207ENST00000476169 hCG_1809904A0A1W2PP81 198 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 A0A1W2PPE2 198 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 A0A1W2PR64 198 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 GXYLT2A0PJZ3 443 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 FAM90A7PA6NKC0 464 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 TMEM200CA6NKL6 621 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 A8MVJ9 347 aa4.44□□□□□ -1.7
VPS13D-207ENST00000476169 FAM90A22PA8MWA6 464 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms