RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 CADM3Q8N126 398 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 VPS37AQ8NEZ2 397 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 TOR1AIP2Q8NFQ8 470 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 MAPK15Q8TD08 544 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 LRTOMTQ8WZ04 291 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 RCN3Q96D15 328 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 FAM84AQ96KN4 292 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 FERD3LQ96RJ6 166 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 WDR41Q9HAD4 459 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.77□□□□□ -0.692e-12■■□□□ 14.4
ABCF1-205ENST00000475993 TMEM9Q9P0T7 183 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 PCDHB12Q9Y5F1 795 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 CDY2AQ9Y6F7 541 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 CDY1Q9Y6F8 540 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 PSME4Q14997 1843 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 H0YIN7 160 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 CFLARO15519 480 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 AKAP10O43572 662 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 CALB1P05937 261 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 OSBPP22059 807 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 WEE1P30291 646 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 GNL1P36915 607 aaPredicted RBP10.77□□□□□ -0.69
ABCF1-205ENST00000475993 IREB2P48200 963 aaKnown RBP10.77□□□□□ -0.69
ABCF1-205ENST00000475993 CNTN2Q02246 1040 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 ENPEPQ07075 957 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 PICALMQ13492 652 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 ITPK1Q13572 414 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 RAB39AQ14964 217 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 TRIM71Q2Q1W2 868 aaKnown RBP10.77□□□□□ -0.69
ABCF1-205ENST00000475993 SMTNL2Q2TAL5 461 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 TMEM270Q6UE05 265 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 TAS2R42Q7RTR8 314 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 IGFN1Q86VF2 1251 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 RALGPS2Q86X27 583 aaPredicted RBP10.77□□□□□ -0.69
ABCF1-205ENST00000475993 DEPDC4Q8N2C3 294 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 TNIP2Q8NFZ5 429 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 ZNF516Q92618 1163 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 LRRC39Q96DD0 335 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 UHRF1Q96T88 793 aaPredicted RBP10.77□□□□□ -0.69
ABCF1-205ENST00000475993 ACO2Q99798 780 aaKnown RBP10.77□□□□□ -0.69
ABCF1-205ENST00000475993 MRPL9Q9BYD2 267 aaKnown RBP10.77□□□□□ -0.69
ABCF1-205ENST00000475993 HMGXB4Q9UGU5 601 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 CPQQ9Y646 472 aa10.77□□□□□ -0.69
ABCF1-205ENST00000475993 SPDYE2BA6NHP3 402 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 STX16-NPEPL1H3BU86 382 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 HAT1O14929 419 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 SLC22A2O15244 555 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 GCATO75600 419 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 ALDOAP04075 364 aaKnown RBP10.76□□□□□ -0.69
ABCF1-205ENST00000475993 SPDYE6P0CI01 402 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 RALBP11234 206 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 YBX3P16989 372 aaKnown RBP eCLIP10.76□□□□□ -0.692e-8■□□□□ 10.6
ABCF1-205ENST00000475993 PRKACAP17612 351 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 IL1R2P27930 398 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 TPTEP56180 551 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 TAP1Q03518 808 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 NFATC3Q12968 1075 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 SPDYE2Q495Y8 402 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 MTX3Q5HYI7 312 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 WDR44Q5JSH3 913 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 BTBD8Q5XKL5 378 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 SLFN13Q68D06 897 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 TMC5Q6UXY8 1006 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 FRA10AC1Q70Z53 315 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 PMEPA1Q969W9 287 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 OR52B2Q96RD2 323 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 NAA50Q9GZZ1 169 aaKnown RBP10.76□□□□□ -0.69
ABCF1-205ENST00000475993 TP63Q9H3D4 680 aaPredicted RBP10.76□□□□□ -0.69
ABCF1-205ENST00000475993 TCF7L2Q9NQB0 619 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 COPG2Q9UBF2 871 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 TBX20Q9UMR3 447 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 CNTN6Q9UQ52 1028 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 AFG3L2Q9Y4W6 797 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 H7C0C1 242 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 CCRL2O00421 344 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 TNPO2O14787 897 aaKnown RBP10.76□□□□□ -0.69
ABCF1-205ENST00000475993 RSL1D1O76021 490 aaKnown RBP10.76□□□□□ -0.69
ABCF1-205ENST00000475993 KRT7P08729 469 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 ENO3P13929 434 aaPredicted RBP10.76□□□□□ -0.69
ABCF1-205ENST00000475993 FGFR3P22607 806 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 TM4SF1P30408 202 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 RARRES1P49788 294 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 PPP2R2BQ00005 443 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 GNA12Q03113 381 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 GRSF1Q12849 480 aaKnown RBP eCLIP10.76□□□□□ -0.69
ABCF1-205ENST00000475993 KCNT1Q5JUK3 1230 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 TTC33Q6PID6 262 aaPredicted RBP10.76□□□□□ -0.69
ABCF1-205ENST00000475993 SLC51AQ86UW1 340 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 HEATR4Q86WZ0 1026 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 MAP4K3Q8IVH8 894 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 HACE1Q8IYU2 909 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 LSMEM2Q8N112 164 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 ZNF786Q8N393 782 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 CLIP4Q8N3C7 705 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 ARFGAP1Q8N6T3 406 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 ZNF781Q8N8C0 355 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 ATP6V0D2Q8N8Y2 350 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 SPATA18Q8TC71 538 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 SLC7A3Q8WY07 619 aa10.76□□□□□ -0.69
ABCF1-205ENST00000475993 ASB9Q96DX5 294 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms