RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 TCAF2A6NFQ2 919 aa25.66■■□□□ 1.7
TMEM54-205ENST00000475208 JUPP14923 745 aa25.66■■□□□ 1.7
TMEM54-205ENST00000475208 RABGAP1LQ5R372 815 aa25.66■■□□□ 1.7
TMEM54-205ENST00000475208 CXorf57Q6NSI4 855 aaKnown RBP25.66■■□□□ 1.7
TMEM54-205ENST00000475208 PRPF39Q86UA1 669 aaKnown RBP25.66■■□□□ 1.7
TMEM54-205ENST00000475208 ELOA2Q8IYF1 753 aaPredicted RBP25.66■■□□□ 1.7
TMEM54-205ENST00000475208 OXR1Q8N573 874 aa25.66■■□□□ 1.7
TMEM54-205ENST00000475208 NXPE2Q96DL1 559 aa25.66■■□□□ 1.7
TMEM54-205ENST00000475208 DCBLD2Q96PD2 775 aa25.66■■□□□ 1.7
TMEM54-205ENST00000475208 BBC3Q96PG8 261 aaPredicted RBP25.66■■□□□ 1.7
TMEM54-205ENST00000475208 COX16Q9P0S2 106 aa25.66■■□□□ 1.7
TMEM54-205ENST00000475208 RTN2O75298 545 aa25.65■■□□□ 1.7
TMEM54-205ENST00000475208 C1SP09871 688 aa25.65■■□□□ 1.7
TMEM54-205ENST00000475208 CDK4P11802 303 aa25.65■■□□□ 1.7
TMEM54-205ENST00000475208 PLK1P53350 603 aa25.65■■□□□ 1.7
TMEM54-205ENST00000475208 MARSP56192 900 aaKnown RBP25.65■■□□□ 1.7
TMEM54-205ENST00000475208 BNIP3Q12983 259 aa25.65■■□□□ 1.7
TMEM54-205ENST00000475208 C6orf118Q5T5N4 469 aa25.65■■□□□ 1.7
TMEM54-205ENST00000475208 DSG4Q86SJ6 1040 aa25.65■■□□□ 1.7
TMEM54-205ENST00000475208 MFSD2AQ8NA29 543 aa25.65■■□□□ 1.7
TMEM54-205ENST00000475208 OR8D1Q8WZ84 308 aa25.65■■□□□ 1.7
TMEM54-205ENST00000475208 FAM131CQ96AQ9 280 aa25.65■■□□□ 1.7
TMEM54-205ENST00000475208 CRELD1Q96HD1 420 aa25.65■■□□□ 1.7
TMEM54-205ENST00000475208 ERVMER34-1Q9H9K5 563 aa25.65■■□□□ 1.7
TMEM54-205ENST00000475208 DDIT4Q9NX09 232 aa25.65■■□□□ 1.7
TMEM54-205ENST00000475208 SLC7A4O43246 635 aa25.64■■□□□ 1.7
TMEM54-205ENST00000475208 SLC2A3P11169 496 aa25.64■■□□□ 1.7
TMEM54-205ENST00000475208 MAT2AP31153 395 aaKnown RBP25.64■■□□□ 1.7
TMEM54-205ENST00000475208 CCR1P32246 355 aa25.64■■□□□ 1.7
TMEM54-205ENST00000475208 RXRGP48443 463 aa25.64■■□□□ 1.7
TMEM54-205ENST00000475208 OXCT1P55809 520 aa25.64■■□□□ 1.7
TMEM54-205ENST00000475208 CDK17Q00537 523 aa25.64■■□□□ 1.7
TMEM54-205ENST00000475208 CENPCQ03188 943 aa25.64■■□□□ 1.7
TMEM54-205ENST00000475208 MORC3Q14149 939 aa25.64■■□□□ 1.7
TMEM54-205ENST00000475208 FBXL22Q6P050 247 aa25.64■■□□□ 1.7
TMEM54-205ENST00000475208 SPATS2Q86XZ4 545 aaKnown RBP25.64■■□□□ 1.7
TMEM54-205ENST00000475208 DEFB106AQ8N104 65 aa25.64■■□□□ 1.7
TMEM54-205ENST00000475208 TSC1Q92574 1164 aa25.64■■□□□ 1.7
TMEM54-205ENST00000475208 RNF34Q969K3 372 aa25.64■■□□□ 1.7
TMEM54-205ENST00000475208 RPRD1AQ96P16 312 aaPredicted RBP25.64■■□□□ 1.7
TMEM54-205ENST00000475208 KDM4CQ9H3R0 1056 aa25.64■■□□□ 1.7
TMEM54-205ENST00000475208 ARHGAP20Q9P2F6 1191 aa25.64■■□□□ 1.7
TMEM54-205ENST00000475208 SLC25A13Q9UJS0 675 aa25.64■■□□□ 1.7
TMEM54-205ENST00000475208 SARDHQ9UL12 918 aa25.64■■□□□ 1.7
TMEM54-205ENST00000475208 KNTC1P50748 2209 aa25.63■■□□□ 1.69
TMEM54-205ENST00000475208 BIN1O00499 593 aa25.63■■□□□ 1.69
TMEM54-205ENST00000475208 PLRG1O43660 514 aaKnown RBP25.63■■□□□ 1.69
TMEM54-205ENST00000475208 ABCG1P45844 678 aa25.63■■□□□ 1.69
TMEM54-205ENST00000475208 PAK1Q13153 545 aa25.63■■□□□ 1.69
TMEM54-205ENST00000475208 ACCSLQ4AC99 568 aa25.63■■□□□ 1.69
TMEM54-205ENST00000475208 HES3Q5TGS1 186 aa25.63■■□□□ 1.69
TMEM54-205ENST00000475208 SFMBT2Q5VUG0 894 aa25.63■■□□□ 1.69
TMEM54-205ENST00000475208 FAM46CQ5VWP2 391 aa25.63■■□□□ 1.69
TMEM54-205ENST00000475208 ENOSF1Q7L5Y1 443 aa25.63■■□□□ 1.69
TMEM54-205ENST00000475208 SLC2A13Q96QE2 648 aa25.63■■□□□ 1.69
TMEM54-205ENST00000475208 SRRTQ9BXP5 876 aaKnown RBP25.63■■□□□ 1.69
TMEM54-205ENST00000475208 ATP9BO43861 1147 aa25.62■■□□□ 1.69
TMEM54-205ENST00000475208 VASPP50552 380 aaPredicted RBP25.62■■□□□ 1.69
TMEM54-205ENST00000475208 TARDBPQ13148 414 aaKnown RBP eCLIP25.62■■□□□ 1.69
TMEM54-205ENST00000475208 POM121L1PQ3SYA9 428 aa25.62■■□□□ 1.69
TMEM54-205ENST00000475208 GJB7Q6PEY0 223 aa25.62■■□□□ 1.69
TMEM54-205ENST00000475208 OR52K2Q8NGK3 314 aa25.62■■□□□ 1.69
TMEM54-205ENST00000475208 ALG14Q96F25 216 aa25.62■■□□□ 1.69
TMEM54-205ENST00000475208 PPP1R9BQ96SB3 815 aa25.62■■□□□ 1.69
TMEM54-205ENST00000475208 CPXM1Q96SM3 734 aa25.62■■□□□ 1.69
TMEM54-205ENST00000475208 CRACR2AQ9BSW2 395 aa25.62■■□□□ 1.69
TMEM54-205ENST00000475208 ASNSD1Q9NWL6 643 aa25.62■■□□□ 1.69
TMEM54-205ENST00000475208 DMTF1Q9Y222 760 aa25.62■■□□□ 1.69
TMEM54-205ENST00000475208 BECN2A8MW95 431 aa25.61■■□□□ 1.69
TMEM54-205ENST00000475208 C1QTNF3-AMACRE9PGA6 284 aa25.61■■□□□ 1.69
TMEM54-205ENST00000475208 GLI1P08151 1106 aa25.61■■□□□ 1.69
TMEM54-205ENST00000475208 NUDT1P36639 197 aa25.61■■□□□ 1.69
TMEM54-205ENST00000475208 USP8P40818 1118 aa25.61■■□□□ 1.69
TMEM54-205ENST00000475208 IRAK1P51617 712 aa25.61■■□□□ 1.69
TMEM54-205ENST00000475208 CNTN1Q12860 1018 aa25.61■■□□□ 1.69
TMEM54-205ENST00000475208 AUHQ13825 339 aaKnown RBP25.61■■□□□ 1.69
TMEM54-205ENST00000475208 AGBL4Q5VU57 503 aa25.61■■□□□ 1.69
TMEM54-205ENST00000475208 FBXL19Q6PCT2 694 aa25.61■■□□□ 1.69
TMEM54-205ENST00000475208 Q6ZVU0 165 aa25.61■■□□□ 1.69
TMEM54-205ENST00000475208 KANSL1Q7Z3B3 1105 aa25.61■■□□□ 1.69
TMEM54-205ENST00000475208 IQCHQ86VS3 1027 aa25.61■■□□□ 1.69
TMEM54-205ENST00000475208 TRIM69Q86WT6 500 aa25.61■■□□□ 1.69
TMEM54-205ENST00000475208 PIP4K2CQ8TBX8 421 aa25.61■■□□□ 1.69
TMEM54-205ENST00000475208 VANGL2Q9ULK5 521 aa25.61■■□□□ 1.69
TMEM54-205ENST00000475208 EIF4E1BA6NMX2 242 aaKnown RBP25.6■■□□□ 1.69
TMEM54-205ENST00000475208 MAGEC1O60732 1142 aa25.6■■□□□ 1.69
TMEM54-205ENST00000475208 HSF2BPO75031 334 aa25.6■■□□□ 1.69
TMEM54-205ENST00000475208 GRAP2O75791 330 aa25.6■■□□□ 1.69
TMEM54-205ENST00000475208 GGCXP38435 758 aa25.6■■□□□ 1.69
TMEM54-205ENST00000475208 DLG2Q15700 870 aa25.6■■□□□ 1.69
TMEM54-205ENST00000475208 ARHGAP44Q17R89 818 aa25.6■■□□□ 1.69
TMEM54-205ENST00000475208 TRIM65Q6PJ69 517 aa25.6■■□□□ 1.69
TMEM54-205ENST00000475208 PASD1Q8IV76 773 aa25.6■■□□□ 1.69
TMEM54-205ENST00000475208 WDTC1Q8N5D0 677 aa25.6■■□□□ 1.69
TMEM54-205ENST00000475208 PPP1R13BQ96KQ4 1090 aa25.6■■□□□ 1.69
TMEM54-205ENST00000475208 FEM1AQ9BSK4 669 aa25.6■■□□□ 1.69
TMEM54-205ENST00000475208 VPS28Q9UK41 221 aa25.6■■□□□ 1.69
TMEM54-205ENST00000475208 PPM1HQ9ULR3 514 aa25.6■■□□□ 1.69
TMEM54-205ENST00000475208 AK5Q9Y6K8 562 aa25.6■■□□□ 1.69
TMEM54-205ENST00000475208 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP25.59■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms