RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 GCNAQ96QF7 691 aa20.25■□□□□ 0.83
SSR1-204ENST00000474597 DDX50Q9BQ39 737 aaKnown RBP20.25■□□□□ 0.83
SSR1-204ENST00000474597 WDR83Q9BRX9 315 aaKnown RBP20.25■□□□□ 0.83
SSR1-204ENST00000474597 IPO11Q9UI26 975 aaKnown RBP20.25■□□□□ 0.83
SSR1-204ENST00000474597 HIDE1A8MVS5 230 aa20.25■□□□□ 0.83
SSR1-204ENST00000474597 CDH16O75309 829 aa20.25■□□□□ 0.83
SSR1-204ENST00000474597 SPAG6O75602 509 aa20.25■□□□□ 0.83
SSR1-204ENST00000474597 MLNP12872 115 aa20.25■□□□□ 0.83
SSR1-204ENST00000474597 NFKB1P19838 968 aa20.25■□□□□ 0.83
SSR1-204ENST00000474597 MAPKAPK2P49137 400 aa20.25■□□□□ 0.83
SSR1-204ENST00000474597 IFI35P80217 286 aaPredicted RBP20.25■□□□□ 0.83
SSR1-204ENST00000474597 RFWD3Q6PCD5 774 aa20.25■□□□□ 0.83
SSR1-204ENST00000474597 TLCD1Q96CP7 247 aa20.25■□□□□ 0.83
SSR1-204ENST00000474597 PPCSQ9HAB8 311 aa20.25■□□□□ 0.83
SSR1-204ENST00000474597 IL21Q9HBE4 155 aa20.25■□□□□ 0.83
SSR1-204ENST00000474597 SMPD4Q9NXE4 827 aa20.25■□□□□ 0.83
SSR1-204ENST00000474597 DENND4CQ5VZ89 1909 aa20.24■□□□□ 0.83
SSR1-204ENST00000474597 RASA4BC9J798 803 aa20.24■□□□□ 0.83
SSR1-204ENST00000474597 POC1B-GALNT4F8VUJ3 575 aa20.24■□□□□ 0.83
SSR1-204ENST00000474597 RASA4O43374 803 aa20.24■□□□□ 0.83
SSR1-204ENST00000474597 RAMP2O60895 175 aa20.24■□□□□ 0.83
SSR1-204ENST00000474597 FAM133BQ5BKY9 247 aaKnown RBP20.24■□□□□ 0.83
SSR1-204ENST00000474597 PPM1LQ5SGD2 360 aa20.24■□□□□ 0.83
SSR1-204ENST00000474597 LRRC8BQ6P9F7 803 aa20.24■□□□□ 0.83
SSR1-204ENST00000474597 ZNF534Q76KX8 674 aa20.24■□□□□ 0.83
SSR1-204ENST00000474597 RIBC1Q8N443 379 aaPredicted RBP20.24■□□□□ 0.83
SSR1-204ENST00000474597 ARL14EPQ8N8R7 260 aaPredicted RBP20.24■□□□□ 0.83
SSR1-204ENST00000474597 NSMCE1Q8WV22 266 aa20.24■□□□□ 0.83
SSR1-204ENST00000474597 HMCESQ96FZ2 354 aa20.24■□□□□ 0.83
SSR1-204ENST00000474597 CFAP36Q96G28 342 aa20.24■□□□□ 0.83
SSR1-204ENST00000474597 RETREG1Q9H6L5 497 aa20.24■□□□□ 0.83
SSR1-204ENST00000474597 NOL6Q9H6R4 1146 aaKnown RBP20.24■□□□□ 0.83
SSR1-204ENST00000474597 SP110Q9HB58 689 aa20.24■□□□□ 0.83
SSR1-204ENST00000474597 ZC3H7BQ9UGR2 993 aaKnown RBP20.24■□□□□ 0.83
SSR1-204ENST00000474597 TTLL3Q9Y4R7 772 aa20.24■□□□□ 0.83
SSR1-204ENST00000474597 MAD1L1Q9Y6D9 718 aa20.24■□□□□ 0.83
SSR1-204ENST00000474597 ERI2A8K979 691 aaKnown RBP20.23■□□□□ 0.83
SSR1-204ENST00000474597 C5orf67F2Z3F1 127 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 HDCP19113 662 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 DNAJB1P25685 340 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 SLC6A4P31645 630 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 CD68P34810 354 aaPredicted RBP20.23■□□□□ 0.83
SSR1-204ENST00000474597 MAGEA3P43357 314 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 POLD3Q15054 466 aaPredicted RBP20.23■□□□□ 0.83
SSR1-204ENST00000474597 KLHL38Q2WGJ6 581 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 TXNDC8Q6A555 127 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 KDM7AQ6ZMT4 941 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 IGDCC3Q8IVU1 814 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 CFAP52Q8N1V2 620 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 FBF1Q8TES7 1133 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 CYP2S1Q96SQ9 504 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 PSMD3O43242 534 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 AP2A1O95782 977 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 RB1P06400 928 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 MYOGP15173 224 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 CDC25CP30307 473 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 GRIA1P42261 906 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 ATP1A2P50993 1020 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 SMAD3P84022 425 aaKnown RBP20.23■□□□□ 0.83
SSR1-204ENST00000474597 PARP15Q460N3 678 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 C5orf22Q49AR2 442 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 TAOK1Q7L7X3 1001 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 HS6ST3Q8IZP7 471 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 IL12RB2Q99665 862 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 ASAH2Q9NR71 780 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 RBM22Q9NW64 420 aaKnown RBP eCLIP20.23■□□□□ 0.83
SSR1-204ENST00000474597 RABGEF1Q9UJ41 708 aa20.23■□□□□ 0.83
SSR1-204ENST00000474597 AGO1Q9UL18 857 aaKnown RBP20.23■□□□□ 0.83
SSR1-204ENST00000474597 ZFP37Q9Y6Q3 630 aaPredicted RBP20.23■□□□□ 0.83
SSR1-204ENST00000474597 KLKB1P03952 638 aa20.22■□□□□ 0.83
SSR1-204ENST00000474597 CLCN4P51793 760 aa20.22■□□□□ 0.83
SSR1-204ENST00000474597 CDH4P55283 916 aa20.22■□□□□ 0.83
SSR1-204ENST00000474597 YBEYP58557 167 aaPredicted RBP20.22■□□□□ 0.83
SSR1-204ENST00000474597 PPP2R2AP63151 447 aa20.22■□□□□ 0.83
SSR1-204ENST00000474597 CYP4F8P98187 520 aa20.22■□□□□ 0.83
SSR1-204ENST00000474597 TERF2Q15554 542 aa20.22■□□□□ 0.83
SSR1-204ENST00000474597 ADGRF1Q5T601 910 aa20.22■□□□□ 0.83
SSR1-204ENST00000474597 CASC4Q6P4E1 433 aa20.22■□□□□ 0.83
SSR1-204ENST00000474597 ZSCAN18Q8TBC5 510 aaPredicted RBP20.22■□□□□ 0.83
SSR1-204ENST00000474597 MYEOVQ96EZ4 313 aa20.22■□□□□ 0.83
SSR1-204ENST00000474597 PPP1R2P1Q96PQ5 205 aa20.22■□□□□ 0.83
SSR1-204ENST00000474597 CORO1BQ9BR76 489 aa20.22■□□□□ 0.83
SSR1-204ENST00000474597 ATXN3LQ9H3M9 355 aa20.22■□□□□ 0.83
SSR1-204ENST00000474597 CTNNAL1Q9UBT7 734 aa20.22■□□□□ 0.83
SSR1-204ENST00000474597 TBK1Q9UHD2 729 aa20.22■□□□□ 0.83
SSR1-204ENST00000474597 CCL16O15467 120 aa20.21■□□□□ 0.83
SSR1-204ENST00000474597 GSTA2P09210 222 aa20.21■□□□□ 0.83
SSR1-204ENST00000474597 MYL4P12829 197 aa20.21■□□□□ 0.83
SSR1-204ENST00000474597 STX2P32856 288 aa20.21■□□□□ 0.83
SSR1-204ENST00000474597 MMP13P45452 471 aa20.21■□□□□ 0.83
SSR1-204ENST00000474597 RENBPP51606 427 aa20.21■□□□□ 0.83
SSR1-204ENST00000474597 GEMIN4P57678 1058 aaKnown RBP20.21■□□□□ 0.83
SSR1-204ENST00000474597 SESN2P58004 480 aaPredicted RBP20.21■□□□□ 0.83
SSR1-204ENST00000474597 SPARCL1Q14515 664 aa20.21■□□□□ 0.83
SSR1-204ENST00000474597 GAREM2Q75VX8 874 aa20.21■□□□□ 0.83
SSR1-204ENST00000474597 TMC8Q8IU68 726 aa20.21■□□□□ 0.83
SSR1-204ENST00000474597 AGGF1Q8N302 714 aaeCLIP20.21■□□□□ 0.834e-23■□□□□ 10.7
SSR1-204ENST00000474597 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP20.21■□□□□ 0.83
SSR1-204ENST00000474597 CNTD1Q8N815 330 aa20.21■□□□□ 0.83
SSR1-204ENST00000474597 SIGLEC10Q96LC7 697 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms