RNA–Protein interactions for RNA: ENST00000474572.6

USP39-214, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 293 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-214ENST00000474572 FAM111AQ96PZ2 611 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 MCMBPQ9BTE3 642 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 MRPL9Q9BYD2 267 aaKnown RBP10.03□□□□□ -0.8
USP39-214ENST00000474572 GPR62Q9BZJ7 368 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 SLC39A8Q9C0K1 460 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 C12orf65Q9H3J6 166 aaKnown RBP10.03□□□□□ -0.8
USP39-214ENST00000474572 MANSC1Q9H8J5 431 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 OLA1Q9NTK5 396 aaKnown RBP10.03□□□□□ -0.8
USP39-214ENST00000474572 SAGE1Q9NXZ1 904 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 BFARQ9NZS9 450 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 SIRPGQ9P1W8 387 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 PPARGC1AQ9UBK2 798 aaKnown RBP10.03□□□□□ -0.8
USP39-214ENST00000474572 VANGL2Q9ULK5 521 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 SOX13Q9UN79 622 aa10.03□□□□□ -0.8
USP39-214ENST00000474572 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.02□□□□□ -0.81
USP39-214ENST00000474572 ARHGAP42A6NI28 874 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 F5H423 210 aaPredicted RBP10.02□□□□□ -0.81
USP39-214ENST00000474572 BIRC5O15392 142 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 GLRA3O75311 464 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 DCTN3O75935 186 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 PARNO95453 639 aaKnown RBP10.02□□□□□ -0.81
USP39-214ENST00000474572 PEX11BO96011 259 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 JCHAINP01591 159 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 ALDOAP04075 364 aaKnown RBP10.02□□□□□ -0.81
USP39-214ENST00000474572 GALTP07902 379 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 HAPLN1P10915 354 aaPredicted RBP10.02□□□□□ -0.81
USP39-214ENST00000474572 CCNB1P14635 433 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 RHOQP17081 205 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 GP5P40197 560 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 GPR15P49685 360 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 CSRP3P50461 194 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 APLP1P51693 650 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 NDST2P52849 883 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 CSE1LP55060 971 aaKnown RBP10.02□□□□□ -0.81
USP39-214ENST00000474572 CRADDP78560 199 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 CDK18Q07002 472 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 CDH17Q12864 832 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 OLIG2Q13516 323 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 PRPSAP1Q14558 356 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 TRIP4Q15650 581 aaPredicted RBP10.02□□□□□ -0.81
USP39-214ENST00000474572 DDR2Q16832 855 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 INSCQ1MX18 579 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 TTC31Q49AM3 519 aaPredicted RBP10.02□□□□□ -0.81
USP39-214ENST00000474572 ANKRD20A4Q4UJ75 823 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 GRTP1Q5TC63 336 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 PIK3R6Q5UE93 754 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 FAM171A1Q5VUB5 890 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 KYAT3Q6YP21 454 aaKnown RBP10.02□□□□□ -0.81
USP39-214ENST00000474572 ARHGAP36Q6ZRI8 547 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 C14orf80Q86SX3 495 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 PACS2Q86VP3 889 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 RNF168Q8IYW5 571 aaPredicted RBP10.02□□□□□ -0.81
USP39-214ENST00000474572 UNC5BQ8IZJ1 945 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 UMODL1-AS1Q8N2C9 162 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 ATPAF2Q8N5M1 289 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 CCDC63Q8NA47 563 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.02□□□□□ -0.81
USP39-214ENST00000474572 STKLD1Q8NE28 680 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 ZNF296Q8WUU4 475 aaPredicted RBP10.02□□□□□ -0.81
USP39-214ENST00000474572 ZNF419Q96HQ0 510 aaPredicted RBP10.02□□□□□ -0.81
USP39-214ENST00000474572 C7orf26Q96N11 449 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 AGAP3Q96P47 875 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 RBBP8Q99708 897 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 CPNE1Q99829 537 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 TTLL2Q9BWV7 592 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 IL22Q9GZX6 179 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 NOL6Q9H6R4 1146 aaKnown RBP10.02□□□□□ -0.81
USP39-214ENST00000474572 MRM3Q9HC36 420 aaKnown RBP10.02□□□□□ -0.81
USP39-214ENST00000474572 GLOD4Q9HC38 313 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 SLC40A1Q9NP59 571 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 PAK6Q9NQU5 681 aaPredicted RBP10.02□□□□□ -0.81
USP39-214ENST00000474572 NDFIP2Q9NV92 336 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.02□□□□□ -0.81
USP39-214ENST00000474572 TMEM248Q9NWD8 314 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 GMIPQ9P107 970 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 CHKBQ9Y259 395 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 AAR2Q9Y312 384 aaKnown RBP10.02□□□□□ -0.81
USP39-214ENST00000474572 PCDHB7Q9Y5E2 793 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 RPS6KL1Q9Y6S9 549 aa10.02□□□□□ -0.81
USP39-214ENST00000474572 DRGXA6NNA5 263 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 H7C4K7 107 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 USP12O75317 370 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 GSRP00390 522 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 ALDH2P05091 517 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 BPGMP07738 259 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 ITGA2BP08514 1039 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 SRGAP2BP0DMP2 458 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 TROVE2P10155 538 aaKnown RBP eCLIP10.01□□□□□ -0.81
USP39-214ENST00000474572 YWHAQP27348 245 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 ADRA1AP35348 466 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 GATMP50440 423 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 LIMK2P53671 638 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 GEMP55040 296 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 TBX4P57082 545 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 RING1Q06587 406 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 SF3A3Q12874 501 aaKnown RBP eCLIP10.01□□□□□ -0.81
USP39-214ENST00000474572 MTA1Q13330 715 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 ANO4Q32M45 955 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 MS4A13Q5J8X5 152 aa10.01□□□□□ -0.81
USP39-214ENST00000474572 MROH9Q5TGP6 573 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms