RNA–Protein interactions for RNA: ENST00000473916.1

VARS2-206, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 2,000 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-206ENST00000473916 ATP5C1P36542 298 aaKnown RBP18.4■□□□□ 0.54
VARS2-206ENST00000473916 ALDH1A3P47895 512 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 COG7P83436 770 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 CDK16Q00536 496 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 RING1Q06587 406 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 ZSCAN26Q16670 478 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 CES3Q6UWW8 571 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 LZTR1Q8N653 840 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 LRRC39Q96DD0 335 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 STAMBPL1Q96FJ0 436 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 TRABDQ9H4I3 376 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 MRPL17Q9NRX2 175 aaKnown RBP18.4■□□□□ 0.54
VARS2-206ENST00000473916 INTS9Q9NV88 658 aaKnown RBP18.4■□□□□ 0.54
VARS2-206ENST00000473916 IL1RAPL1Q9NZN1 696 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 DNMT3LQ9UJW3 386 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 TRHDEQ9UKU6 1024 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 J3KR12 359 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 TRDMT1O14717 391 aaKnown RBP18.4■□□□□ 0.54
VARS2-206ENST00000473916 MT-CYBP00156 380 aaPredicted RBP18.4■□□□□ 0.54
VARS2-206ENST00000473916 HLA-DQB2P05538 268 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 CSH1P0DML2 217 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 CSH2P0DML3 217 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 MLNP12872 115 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 RHOQP17081 205 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 MSH2P43246 934 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 SARNPP82979 210 aaKnown RBP18.4■□□□□ 0.54
VARS2-206ENST00000473916 TMEM150AQ86TG1 271 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 PPM1NQ8N819 430 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 KLF6Q99612 283 aaPredicted RBP18.4■□□□□ 0.54
VARS2-206ENST00000473916 ZNF334Q9HCZ1 680 aaPredicted RBP18.4■□□□□ 0.54
VARS2-206ENST00000473916 TMEM248Q9NWD8 314 aa18.4■□□□□ 0.54
VARS2-206ENST00000473916 PPARGC1AQ9UBK2 798 aaKnown RBP18.4■□□□□ 0.54
VARS2-206ENST00000473916 SCAMP3O14828 347 aaKnown RBP18.39■□□□□ 0.53
VARS2-206ENST00000473916 MATN3O15232 486 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 LILRB3O75022 631 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 KLKB1P03952 638 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 TACR2P21452 398 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 STX2P32856 288 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 FAM133BQ5BKY9 247 aaKnown RBP18.39■□□□□ 0.53
VARS2-206ENST00000473916 HECTD3Q5T447 861 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 SNX30Q5VWJ9 437 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 UBE2Q1Q7Z7E8 422 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 CTAGE3PQ8IX95 158 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 UMODL1-AS1Q8N2C9 162 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 SLC44A1Q8WWI5 657 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 MYRFLQ96LU7 910 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 VAT1Q99536 393 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 IL12RB2Q99665 862 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 ZBP1Q9H171 429 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 FETUBQ9UGM5 382 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 IPO11Q9UI26 975 aaKnown RBP18.39■□□□□ 0.53
VARS2-206ENST00000473916 PCDHA11Q9Y5I1 949 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 INSL5Q9Y5Q6 135 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 MYO7AQ13402 2215 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 CHD5Q8TDI0 1954 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 LCHNA4D1U4 455 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 SDR42E2A6NKP2 422 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 A6NNZ2 444 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 GOLGA8RI6L899 631 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 SPAG6O75602 509 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 PEX11BO96011 259 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 CNPP09543 421 aaKnown RBP18.39■□□□□ 0.53
VARS2-206ENST00000473916 IRF1P10914 325 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 PRKCHP24723 683 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 TUBB8Q3ZCM7 444 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 ITPRIPL1Q6GPH6 555 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 DNAJB7Q7Z6W7 309 aaPredicted RBP18.39■□□□□ 0.53
VARS2-206ENST00000473916 LGI2Q8N0V4 545 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 KLHL23Q8NBE8 558 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 PDZD8Q8NEN9 1154 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 GSDMBQ8TAX9 411 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 GDAP1Q8TB36 358 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 KLHL5Q96PQ7 755 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 SLC22A12Q96S37 553 aa18.39■□□□□ 0.53
VARS2-206ENST00000473916 MIA3Q5JRA6 1907 aa18.38■□□□□ 0.53
VARS2-206ENST00000473916 DRGXA6NNA5 263 aa18.38■□□□□ 0.53
VARS2-206ENST00000473916 SUN1O94901 812 aa18.38■□□□□ 0.53
VARS2-206ENST00000473916 FGBP02675 491 aa18.38■□□□□ 0.53
VARS2-206ENST00000473916 TPH1P17752 444 aa18.38■□□□□ 0.53
VARS2-206ENST00000473916 HTRA4P83105 476 aaPredicted RBP18.38■□□□□ 0.53
VARS2-206ENST00000473916 ZNF33AQ06730 810 aa18.38■□□□□ 0.53
VARS2-206ENST00000473916 RASA2Q15283 850 aa18.38■□□□□ 0.53
VARS2-206ENST00000473916 TAF12Q16514 161 aa18.38■□□□□ 0.53
VARS2-206ENST00000473916 NUGGCQ68CJ6 796 aa18.38■□□□□ 0.53
VARS2-206ENST00000473916 DENND1CQ8IV53 801 aa18.38■□□□□ 0.53
VARS2-206ENST00000473916 CEP295NLQ96MC4 621 aa18.38■□□□□ 0.53
VARS2-206ENST00000473916 RBM22Q9NW64 420 aaKnown RBP eCLIP18.38■□□□□ 0.53
VARS2-206ENST00000473916 SMPD4Q9NXE4 827 aa18.38■□□□□ 0.53
VARS2-206ENST00000473916 TRPM5Q9NZQ8 1165 aa18.38■□□□□ 0.53
VARS2-206ENST00000473916 HSFX1Q9UBD0 423 aa18.38■□□□□ 0.53
VARS2-206ENST00000473916 HBS1LQ9Y450 684 aaKnown RBP18.38■□□□□ 0.53
VARS2-206ENST00000473916 PCDHB12Q9Y5F1 795 aa18.38■□□□□ 0.53
VARS2-206ENST00000473916 DENND4CQ5VZ89 1909 aa18.38■□□□□ 0.53
VARS2-206ENST00000473916 ELF1P32519 619 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 ACVRL1P37023 503 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 SGSHP51688 502 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 QPCTQ16769 361 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 CERCAMQ5T4B2 595 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 STEAP4Q687X5 459 aa18.37■□□□□ 0.53
VARS2-206ENST00000473916 SPRED2Q7Z698 418 aa18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms