RNA–Protein interactions for RNA: ENST00000473711.1

SP140-208, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 644 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-208ENST00000473711 USP13Q92995 863 aaPredicted RBP11.01□□□□□ -0.65
SP140-208ENST00000473711 RTP4Q96DX8 246 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 TMA16Q96EY4 203 aaKnown RBP11.01□□□□□ -0.65
SP140-208ENST00000473711 P2RY11Q96G91 374 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 PRICKLE1Q96MT3 831 aaPredicted RBP11.01□□□□□ -0.65
SP140-208ENST00000473711 FERMT1Q9BQL6 677 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 CEP41Q9BYV8 373 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 BRD8Q9H0E9 1235 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 ADAM7Q9H2U9 754 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 NOL6Q9H6R4 1146 aaKnown RBP11.01□□□□□ -0.65
SP140-208ENST00000473711 DZANK1Q9NVP4 752 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 DONSONQ9NYP3 566 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 PAK5Q9P286 719 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 STOML2Q9UJZ1 356 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 ARHGAP26Q9UNA1 814 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 CCL26Q9Y258 94 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 ZNF510Q9Y2H8 683 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 MYO7AQ13402 2215 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 UNC80Q8N2C7 3258 aa11.01□□□□□ -0.65
SP140-208ENST00000473711 RANBP2P49792 3224 aaKnown RBP11□□□□□ -0.65
SP140-208ENST00000473711 ARHGAP42A6NI28 874 aa11□□□□□ -0.65
SP140-208ENST00000473711 SOBPA7XYQ1 873 aa11□□□□□ -0.65
SP140-208ENST00000473711 RASA4BC9J798 803 aa11□□□□□ -0.65
SP140-208ENST00000473711 KCNK1O00180 336 aa11□□□□□ -0.65
SP140-208ENST00000473711 RNF103O00237 685 aa11□□□□□ -0.65
SP140-208ENST00000473711 RASA4O43374 803 aa11□□□□□ -0.65
SP140-208ENST00000473711 TBL1XO60907 577 aa11□□□□□ -0.65
SP140-208ENST00000473711 STK10O94804 968 aaKnown RBP11□□□□□ -0.65
SP140-208ENST00000473711 GLP2RO95838 553 aa11□□□□□ -0.65
SP140-208ENST00000473711 CCNCP24863 283 aa11□□□□□ -0.65
SP140-208ENST00000473711 OR1E1P30953 314 aa11□□□□□ -0.65
SP140-208ENST00000473711 MAPKAPK2P49137 400 aa11□□□□□ -0.65
SP140-208ENST00000473711 CDH4P55283 916 aa11□□□□□ -0.65
SP140-208ENST00000473711 WASHC5Q12768 1159 aa11□□□□□ -0.65
SP140-208ENST00000473711 ANKRD20A2Q5SQ80 823 aa11□□□□□ -0.65
SP140-208ENST00000473711 FAXCQ5TGI0 409 aa11□□□□□ -0.65
SP140-208ENST00000473711 ANKRD20A1Q5TYW2 823 aa11□□□□□ -0.65
SP140-208ENST00000473711 ANKRD20A3Q5VUR7 823 aa11□□□□□ -0.65
SP140-208ENST00000473711 HIBCHQ6NVY1 386 aaPredicted RBP11□□□□□ -0.65
SP140-208ENST00000473711 ANKRD54Q6NXT1 300 aa11□□□□□ -0.65
SP140-208ENST00000473711 EMBQ6PCB8 327 aa11□□□□□ -0.65
SP140-208ENST00000473711 TMEM184AQ6ZMB5 413 aa11□□□□□ -0.65
SP140-208ENST00000473711 PID1Q7Z2X4 250 aa11□□□□□ -0.65
SP140-208ENST00000473711 MTERF4Q7Z6M4 381 aaKnown RBP11□□□□□ -0.65
SP140-208ENST00000473711 ZNF354CQ86Y25 554 aa11□□□□□ -0.65
SP140-208ENST00000473711 BBS7Q8IWZ6 715 aa11□□□□□ -0.65
SP140-208ENST00000473711 ATPAF2Q8N5M1 289 aa11□□□□□ -0.65
SP140-208ENST00000473711 EFHBQ8N7U6 833 aa11□□□□□ -0.65
SP140-208ENST00000473711 USP33Q8TEY7 942 aa11□□□□□ -0.65
SP140-208ENST00000473711 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11□□□□□ -0.65
SP140-208ENST00000473711 HDAC11Q96DB2 347 aa11□□□□□ -0.65
SP140-208ENST00000473711 HMCESQ96FZ2 354 aa11□□□□□ -0.65
SP140-208ENST00000473711 TSGA13Q96PP4 275 aa11□□□□□ -0.65
SP140-208ENST00000473711 FMO2Q99518 471 aa11□□□□□ -0.65
SP140-208ENST00000473711 TDP1Q9NUW8 608 aa11□□□□□ -0.65
SP140-208ENST00000473711 ZNF212Q9UDV6 495 aa11□□□□□ -0.65
SP140-208ENST00000473711 MTRF1LQ9UGC7 380 aaKnown RBP11□□□□□ -0.65
SP140-208ENST00000473711 CDH22Q9UJ99 828 aa11□□□□□ -0.65
SP140-208ENST00000473711 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.99□□□□□ -0.65
SP140-208ENST00000473711 A0A0A0MRY4 1105 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP10.99□□□□□ -0.65
SP140-208ENST00000473711 F5H423 210 aaPredicted RBP10.99□□□□□ -0.65
SP140-208ENST00000473711 TP73O15350 636 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 MAFKO60675 156 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 RAMP2O60895 175 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 CLDN11O75508 207 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 PAPLNO95428 1278 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 PRAMEF12O95522 483 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 METTL18O95568 372 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 JCHAINP01591 159 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 FSHRP23945 695 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 PTPN3P26045 913 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 ACVRL1P37023 503 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 NUMBP49757 651 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 BASP1P80723 227 aaKnown RBP10.99□□□□□ -0.65
SP140-208ENST00000473711 CAV1Q03135 178 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 ZNF177Q13360 481 aaPredicted RBP10.99□□□□□ -0.65
SP140-208ENST00000473711 ADAM15Q13444 863 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 POLD3Q15054 466 aaPredicted RBP10.99□□□□□ -0.65
SP140-208ENST00000473711 RNASEH2BQ5TBB1 312 aaKnown RBP10.99□□□□□ -0.65
SP140-208ENST00000473711 SYCE2Q6PIF2 218 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 RHBDF2Q6PJF5 856 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 ARHGEF18Q6ZSZ5 1173 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 CHST9Q7L1S5 443 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 PCGF5Q86SE9 256 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 GPR149Q86SP6 731 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 ARID3BQ8IVW6 561 aaPredicted RBP10.99□□□□□ -0.65
SP140-208ENST00000473711 PPIL6Q8IXY8 311 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 ZNF567Q8N184 647 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 CARNMT1Q8N4J0 409 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 RIN3Q8TB24 985 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 CPT1BQ92523 772 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 CAVIN3Q969G5 261 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 PWWP2AQ96N64 755 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 SPATA13Q96N96 652 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 RETREG1Q9H6L5 497 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 ETNK1Q9HBU6 452 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 RAB6BQ9NRW1 208 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 ZNF446Q9NWS9 450 aa10.99□□□□□ -0.65
SP140-208ENST00000473711 KLHL8Q9P2G9 620 aaPredicted RBP10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms