RNA–Protein interactions for RNA: ENST00000473542.1

BBX-223, Transcript of BBX, HMG-box containing, human

TSL 3

Gene BBX, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
BBX-223	ENST00000473542	SHC2	P98077	582 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	GALNT2	Q10471	571 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	NFIL3	Q16649	462 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	CERKL	Q49MI3	558 aa	Predicted RBP	5.1	□□□□□ -1.59
BBX-223	ENST00000473542	VWA5B1	Q5TIE3	1220 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	AADACL2	Q6P093	401 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	MTFR2	Q6P444	385 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	GJB7	Q6PEY0	223 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	C4orf50	Q6ZRC1	276 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	RTL10	Q7L3V2	364 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	UEVLD	Q8IX04	471 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	PAQR4	Q8N4S7	273 aa	Predicted RBP	5.1	□□□□□ -1.59
BBX-223	ENST00000473542	TDRD9	Q8NDG6	1382 aa	Known RBP	5.1	□□□□□ -1.59
BBX-223	ENST00000473542	TNIP2	Q8NFZ5	429 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	RFWD2	Q8NHY2	731 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	NFKBID	Q8NI38	313 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	ZFPM2	Q8WW38	1151 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	ZBTB10	Q96DT7	871 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	RNFT2	Q96EX2	444 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	ABHD14A	Q9BUJ0	271 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	NPL	Q9BXD5	320 aa	Predicted RBP	5.1	□□□□□ -1.59
BBX-223	ENST00000473542	INTS2	Q9H0H0	1204 aa	Known RBP	5.1	□□□□□ -1.59
BBX-223	ENST00000473542	CPNE5	Q9HCH3	593 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	OLA1	Q9NTK5	396 aa	Known RBP	5.1	□□□□□ -1.59
BBX-223	ENST00000473542	SEMA4G	Q9NTN9	838 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	ARL8B	Q9NVJ2	186 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	ALKBH4	Q9NXW9	302 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	ARPP21	Q9UBL0	812 aa	Predicted RBP	5.1	□□□□□ -1.59
BBX-223	ENST00000473542	FBXO9	Q9UK97	447 aa	Predicted RBP	5.1	□□□□□ -1.59
BBX-223	ENST00000473542	SCIN	Q9Y6U3	715 aa		5.1	□□□□□ -1.59
BBX-223	ENST00000473542	LRRC3C	A6NJW4	275 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	KCNJ18	B7U540	433 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	TMEM232	C9JQI7	657 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	TSPAN4	O14817	238 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	RTN3	O95197	1032 aa	Predicted RBP	5.09	□□□□□ -1.59
BBX-223	ENST00000473542	AKR1A1	P14550	325 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	ABCD3	P28288	659 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	IDUA	P35475	653 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	HNF1B	P35680	557 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	ANXA2R	Q3ZCQ2	193 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	CC2D1B	Q5T0F9	858 aa	Known RBP	5.09	□□□□□ -1.59
BBX-223	ENST00000473542	AKNAD1	Q5T1N1	836 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	MDGA2	Q7Z553	956 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	TMEM200A	Q86VY9	491 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	C16orf71	Q8IYS4	520 aa	Predicted RBP	5.09	□□□□□ -1.59
BBX-223	ENST00000473542	FAM47B	Q8NA70	645 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	BCAS4	Q8TDM0	211 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	CENPI	Q92674	756 aa	Predicted RBP	5.09	□□□□□ -1.59
BBX-223	ENST00000473542	KCNJ9	Q92806	393 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	NELL1	Q92832	810 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	RITA1	Q96K30	269 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	TREX2	Q9BQ50	279 aa	Predicted RBP	5.09	□□□□□ -1.59
BBX-223	ENST00000473542	HDHD5	Q9BXW7	423 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	OSBPL5	Q9H0X9	879 aa	Predicted RBP	5.09	□□□□□ -1.59
BBX-223	ENST00000473542	SH3BP4	Q9P0V3	963 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	SERGEF	Q9UGK8	458 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	SLC25A13	Q9UJS0	675 aa		5.09	□□□□□ -1.59
BBX-223	ENST00000473542	DNAJC9-AS1	A6NH13	148 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	TEX22	C9J3V5	150 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	CYP2D6	P10635	497 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	LYL1	P12980	280 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	BDNF	P23560	247 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	PSMA4	P25789	261 aa	Known RBP	5.08	□□□□□ -1.6
BBX-223	ENST00000473542	GSTM2	P28161	218 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	TACR3	P29371	465 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	STAT1	P42224	750 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	PAFAH1B1	P43034	410 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	SOX2	P48431	317 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	PTP4A2	Q12974	167 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	BYSL	Q13895	437 aa	Known RBP	5.08	□□□□□ -1.6
BBX-223	ENST00000473542	KPNB1	Q14974	876 aa	Known RBP	5.08	□□□□□ -1.6
BBX-223	ENST00000473542	SEC23B	Q15437	767 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	ZNF766	Q5HY98	468 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	NEK10	Q6ZWH5	1172 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	ADGRG6	Q86SQ4	1221 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	ARHGEF25	Q86VW2	580 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	BRSK2	Q8IWQ3	736 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	SRRM1	Q8IYB3	904 aa	Known RBP	5.08	□□□□□ -1.6
BBX-223	ENST00000473542	TDRD7	Q8NHU6	1098 aa	Known RBP	5.08	□□□□□ -1.6
BBX-223	ENST00000473542	C5orf34	Q96MH7	638 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	ZNF347	Q96SE7	839 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	CTDSP1	Q9GZU7	261 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	KLK15	Q9H2R5	256 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	TTC12	Q9H892	705 aa	Predicted RBP	5.08	□□□□□ -1.6
BBX-223	ENST00000473542	TBC1D22B	Q9NU19	505 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	TMEM248	Q9NWD8	314 aa		5.08	□□□□□ -1.6
BBX-223	ENST00000473542	FBXO2	Q9UK22	296 aa	Predicted RBP	5.08	□□□□□ -1.6
BBX-223	ENST00000473542	HBP1	O60381	514 aa		5.07	□□□□□ -1.6
BBX-223	ENST00000473542	CHRM4	P08173	479 aa		5.07	□□□□□ -1.6
BBX-223	ENST00000473542	CHM	P24386	653 aa		5.07	□□□□□ -1.6
BBX-223	ENST00000473542	MTNR1A	P48039	350 aa		5.07	□□□□□ -1.6
BBX-223	ENST00000473542	DCAF7	P61962	342 aa		5.07	□□□□□ -1.6
BBX-223	ENST00000473542	PROSER3	Q2NL68	480 aa		5.07	□□□□□ -1.6
BBX-223	ENST00000473542	ZNF813	Q6ZN06	617 aa		5.07	□□□□□ -1.6
BBX-223	ENST00000473542	RBM44	Q6ZP01	1051 aa	Known RBP	5.07	□□□□□ -1.6
BBX-223	ENST00000473542	H1FNT	Q75WM6	255 aa	Predicted RBP	5.07	□□□□□ -1.6
BBX-223	ENST00000473542	TFAP2D	Q7Z6R9	452 aa		5.07	□□□□□ -1.6
BBX-223	ENST00000473542	CHSY1	Q86X52	802 aa		5.07	□□□□□ -1.6
BBX-223	ENST00000473542	RHPN2	Q8IUC4	686 aa		5.07	□□□□□ -1.6
BBX-223	ENST00000473542	SCARB1	Q8WTV0	552 aa		5.07	□□□□□ -1.6

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