RNA–Protein interactions for RNA: ENST00000472147.1

ITGB1-209, Transcript of integrin subunit beta 1, humanhuman

TSL 3

Gene ITGB1, Length 668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-209ENST00000472147 TAF1BQ53T94 588 aaPredicted RBP6.08□□□□□ -1.44
ITGB1-209ENST00000472147 FYB2Q5VWT5 728 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 FBXL19Q6PCT2 694 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 CCDC73Q6ZRK6 1079 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 USP30Q70CQ3 517 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 ADAT2Q7Z6V5 191 aaKnown RBP6.08□□□□□ -1.44
ITGB1-209ENST00000472147 CCDC65Q8IXS2 484 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 FUKQ8N0W3 1084 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 ZNF507Q8TCN5 953 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 SAP25Q8TEE9 199 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 SNRNP27Q8WVK2 155 aaKnown RBP6.08□□□□□ -1.44
ITGB1-209ENST00000472147 BIRC7Q96CA5 298 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 WDR89Q96FK6 387 aaPredicted RBP6.08□□□□□ -1.44
ITGB1-209ENST00000472147 EPSTI1Q96J88 318 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 MEGF10Q96KG7 1140 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 RSRP1Q9BUV0 290 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 DPH1Q9BZG8 443 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 DNAI2Q9GZS0 605 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 DPEP3Q9H4B8 488 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 PNPLA8Q9NP80 782 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 CD93Q9NPY3 652 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 KRT82Q9NSB4 513 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 PANK4Q9NVE7 773 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 MTPAPQ9NVV4 582 aaKnown RBP eCLIP6.08□□□□□ -1.44
ITGB1-209ENST00000472147 TBC1D7Q9P0N9 293 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 CGNQ9P2M7 1197 aaKnown RBP6.08□□□□□ -1.44
ITGB1-209ENST00000472147 NME7Q9Y5B8 376 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 PCDHA5Q9Y5H7 936 aa6.08□□□□□ -1.44
ITGB1-209ENST00000472147 SRPRBQ9Y5M8 271 aaKnown RBP6.08□□□□□ -1.44
ITGB1-209ENST00000472147 UBR5O95071 2799 aaPredicted RBP6.08□□□□□ -1.44
ITGB1-209ENST00000472147 PCDH15Q96QU1 1955 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 PTPRDP23468 1912 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 A0A1W2PPC4 97 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 ARHGAP6O43182 974 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 TLX3O43711 291 aaPredicted RBP6.07□□□□□ -1.44
ITGB1-209ENST00000472147 RNASEH1O60930 286 aaKnown RBP6.07□□□□□ -1.44
ITGB1-209ENST00000472147 STC2O76061 302 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 TIAF1O95411 115 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 SEMA4FO95754 770 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 KLKB1P03952 638 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 DNTTP04053 509 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 ATP5BP06576 529 aaKnown RBP6.07□□□□□ -1.44
ITGB1-209ENST00000472147 DLATP10515 647 aaKnown RBP6.07□□□□□ -1.44
ITGB1-209ENST00000472147 IRF1P10914 325 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 RALAP11233 206 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 RARGP13631 454 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 C6P13671 934 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 IDEP14735 1019 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 CKMT2P17540 419 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 ABCB4P21439 1286 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 PGFP49763 221 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 LIG3P49916 1009 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 ZNF445P59923 1031 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 MYL6P60660 151 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 RPS26P62854 115 aaKnown RBP6.07□□□□□ -1.44
ITGB1-209ENST00000472147 AMPD3Q01432 767 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 GRIN1Q05586 938 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 GEN1Q17RS7 908 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 MPPE1Q53F39 396 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 CCDC157Q569K6 752 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 C10orf120Q5SQS8 335 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 BROXQ5VW32 411 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 PCSK4Q6UW60 755 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 SERPINA13PQ6UXR4 307 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 BRAPQ7Z569 592 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 ANKS1BQ7Z6G8 1248 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 FAM124AQ86V42 546 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 CBWD2Q8IUF1 395 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 CPXM2Q8N436 756 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 DCBLD1Q8N8Z6 715 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 XXYLT1Q8NBI6 393 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 RBBP8NLQ8NC74 664 aaPredicted RBP6.07□□□□□ -1.44
ITGB1-209ENST00000472147 ZNF248Q8NDW4 579 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 NOC3LQ8WTT2 800 aaKnown RBP6.07□□□□□ -1.44
ITGB1-209ENST00000472147 TMEM174Q8WUU8 243 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 TAF4BQ92750 862 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 GRAMD1AQ96CP6 724 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 ERLEC1Q96DZ1 483 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 TMA16Q96EY4 203 aaKnown RBP6.07□□□□□ -1.44
ITGB1-209ENST00000472147 CNDP2Q96KP4 475 aaKnown RBP6.07□□□□□ -1.44
ITGB1-209ENST00000472147 ZNF578Q96N58 590 aaPredicted RBP6.07□□□□□ -1.44
ITGB1-209ENST00000472147 HNRNPABQ99729 332 aaKnown RBP6.07□□□□□ -1.44
ITGB1-209ENST00000472147 SMOQ99835 787 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 TRIM9Q9C026 710 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 XYLT2Q9H1B5 865 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 LHX5Q9H2C1 402 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 TMEM245Q9H330 911 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 C6orf106Q9H6K1 298 aaPredicted RBP6.07□□□□□ -1.44
ITGB1-209ENST00000472147 PLK2Q9NYY3 685 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 HSPBP1Q9NZL4 362 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 COL6A6A6NMZ7 2263 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 SHROOM3Q8TF72 1996 aa6.07□□□□□ -1.44
ITGB1-209ENST00000472147 NOTCH2Q04721 2471 aa6.06□□□□□ -1.44
ITGB1-209ENST00000472147 PTPRJQ12913 1337 aa6.06□□□□□ -1.44
ITGB1-209ENST00000472147 PLXND1Q9Y4D7 1925 aa6.06□□□□□ -1.44
ITGB1-209ENST00000472147 LRRC72A6NJI9 287 aa6.06□□□□□ -1.44
ITGB1-209ENST00000472147 TLR4O00206 839 aa6.06□□□□□ -1.44
ITGB1-209ENST00000472147 IKBKBO14920 756 aa6.06□□□□□ -1.44
ITGB1-209ENST00000472147 STX6O43752 255 aa6.06□□□□□ -1.44
ITGB1-209ENST00000472147 MAGEC1O60732 1142 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms